Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1547168 |
| length | 725 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC110491647 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 22828198 ~ 22876076 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1547142 | lncRNA | upstream | 59505 | 22768485 ~ 22768693 (+) | True | G1353387 |
| TU1547082 | lncRNA | upstream | 103725 | 22723472 ~ 22724473 (+) | True | G1353332 |
| TU1547109 | lncRNA | upstream | 105920 | 22721235 ~ 22722278 (+) | True | G1353355 |
| TU1547069 | lncRNA | upstream | 141092 | 22686863 ~ 22687106 (+) | True | G1353326 |
| TU1547065 | lncRNA | upstream | 143759 | 22684125 ~ 22684439 (+) | True | G1353322 |
| TU1547217 | lncRNA | downstream | 55705 | 22891918 ~ 22892117 (+) | True | G1353449 |
| TU1547218 | lncRNA | downstream | 56210 | 22892423 ~ 22892814 (+) | True | G1353450 |
| TU1547219 | lncRNA | downstream | 57012 | 22893225 ~ 22893512 (+) | True | G1353451 |
| TU1547160 | lncRNA | downstream | 62878 | 22899091 ~ 22905565 (+) | True | G1353399 |
| TU1547287 | lncRNA | downstream | 167205 | 23003418 ~ 23007616 (+) | False | G1353506 |
| XM_036946521.1 | mRNA | upstream | 721 | 22787829 ~ 22827477 (+) | False | si:ch211-234p6.5 |
| XM_036946519.1 | mRNA | upstream | 721 | 22807411 ~ 22827477 (+) | False | si:ch211-234p6.5 |
| XM_036946524.1 | mRNA | upstream | 721 | 22807411 ~ 22827477 (+) | False | si:ch211-234p6.5 |
| XM_036946526.1 | mRNA | upstream | 721 | 22807411 ~ 22827477 (+) | False | si:ch211-234p6.5 |
| XM_036946518.1 | mRNA | upstream | 721 | 22807412 ~ 22827477 (+) | False | si:ch211-234p6.5 |
| XM_021565252.2 | mRNA | downstream | 41044 | 22877257 ~ 22882635 (+) | True | fgf21 |
| XM_021565261.2 | mRNA | downstream | 148700 | 22984913 ~ 22987169 (+) | True | si:dkey-197c15.6 |
| XM_021565263.2 | mRNA | downstream | 177619 | 23013832 ~ 23043155 (+) | True | zgc:56095 |
| XM_036946541.1 | mRNA | downstream | 217644 | 23053857 ~ 23069999 (+) | False | syt5b |
| XM_021565264.2 | mRNA | downstream | 220388 | 23056601 ~ 23069999 (+) | True | syt5b |
| TU1546739 | other | upstream | 195893 | 22631879 ~ 22632305 (+) | True | G1353021 |
| TU1545079 | other | upstream | 827947 | 21999357 ~ 22000251 (+) | False | LOC110491629 |
| TU1545030 | other | upstream | 1147317 | 21679224 ~ 21680881 (+) | True | G1351501 |
| TU1544874 | other | upstream | 1423081 | 21402227 ~ 21405117 (+) | True | G1351366 |
| TU1544755 | other | upstream | 1607051 | 21220765 ~ 21221147 (+) | True | G1351274 |
| TU1547300 | other | downstream | 209056 | 23045269 ~ 23045884 (+) | True | G1353519 |
| TU1547339 | other | downstream | 287646 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1547458 | other | downstream | 462244 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547936 | other | downstream | 643876 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1548546 | other | downstream | 1157405 | 23993618 ~ 23995021 (+) | True | G1354668 |
