Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001159339.1 |
| length | 1008 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | ifn5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24889101 ~ 24897741 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1549304 | lncRNA | upstream | 8929 | 24880828 ~ 24881093 (+) | True | G1355366 |
| TU1549295 | lncRNA | upstream | 17410 | 24872029 ~ 24872612 (+) | True | G1355357 |
| TU1549294 | lncRNA | upstream | 18734 | 24870960 ~ 24871288 (+) | True | G1355356 |
| TU1549289 | lncRNA | upstream | 19946 | 24865054 ~ 24870076 (+) | False | G1355352 |
| TU1549312 | lncRNA | downstream | 3762 | 24896433 ~ 24897741 (+) | True | ifn5 |
| TU1549317 | lncRNA | downstream | 8380 | 24901051 ~ 24901362 (+) | True | G1355377 |
| TU1549335 | lncRNA | downstream | 46117 | 24938788 ~ 24939064 (+) | True | G1355394 |
| TU1549379 | lncRNA | downstream | 108968 | 25001639 ~ 25002613 (+) | True | G1355435 |
| TU1549387 | lncRNA | downstream | 118341 | 25011012 ~ 25011482 (+) | True | G1355443 |
| XM_021567359.2 | mRNA | upstream | 28892 | 24857512 ~ 24861130 (+) | True | ccr10 |
| XM_036946592.1 | mRNA | upstream | 60704 | 24826163 ~ 24829318 (+) | False | LOC110491705 |
| trnaa-ugc-127 | mRNA | downstream | 138658 | 25031329 ~ 25031399 (+) | True | trnaa-ugc-127 |
| XM_021565361.2 | mRNA | downstream | 153021 | 25045692 ~ 25090054 (+) | False | mapta |
| XM_021565371.2 | mRNA | downstream | 153085 | 25045756 ~ 25090054 (+) | False | mapta |
| XM_021565380.2 | mRNA | downstream | 153085 | 25045756 ~ 25090119 (+) | False | mapta |
| XM_021565353.2 | mRNA | downstream | 153085 | 25045756 ~ 25092985 (+) | False | mapta |
| TU1549230 | other | upstream | 106510 | 24764639 ~ 24783512 (+) | True | dcakd |
| TU1549200 | other | upstream | 206103 | 24681414 ~ 24683919 (+) | False | G1355273 |
| TU1549194 | other | upstream | 208907 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549199 | other | upstream | 209303 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1548560 | other | upstream | 799988 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1550905 | other | downstream | 1183870 | 26076541 ~ 26089383 (+) | True | znf281b |
| TU1551395 | other | downstream | 1412280 | 26304951 ~ 26314801 (+) | False | mpp3b |
| TU1551392 | other | downstream | 1413821 | 26306492 ~ 26314801 (+) | False | mpp3b |
| TU1551396 | other | downstream | 1419025 | 26311696 ~ 26314801 (+) | False | mpp3b |
| TU1551398 | other | downstream | 1419025 | 26311696 ~ 26314801 (+) | True | mpp3b |
