Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021565525.2 |
| length | 1189 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 5 |
| gene id | pagr1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28049066 ~ 28081371 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K14973 | PA1; PAXIP1-associated protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1552942 | lncRNA | upstream | 14601 | 28020384 ~ 28034898 (+) | True | G1358671 |
| TU1552925 | lncRNA | upstream | 44975 | 28002309 ~ 28004524 (+) | True | G1358656 |
| TU1552847 | lncRNA | upstream | 63267 | 27985456 ~ 27986232 (+) | False | LOC110491776 |
| TU1552848 | lncRNA | upstream | 63608 | 27985456 ~ 27985891 (+) | True | LOC110491776 |
| TU1552881 | lncRNA | upstream | 104243 | 27942376 ~ 27945256 (+) | True | G1358619 |
| TU1553007 | lncRNA | downstream | 21794 | 28103165 ~ 28127485 (+) | True | G1358725 |
| TU1553040 | lncRNA | downstream | 95924 | 28177295 ~ 28181077 (+) | True | G1358757 |
| TU1553141 | lncRNA | downstream | 216898 | 28298269 ~ 28298893 (+) | True | G1358839 |
| TU1553261 | lncRNA | downstream | 392507 | 28473878 ~ 28474231 (+) | True | G1358944 |
| TU1553260 | lncRNA | downstream | 393523 | 28474894 ~ 28478300 (+) | True | G1358943 |
| XM_021565513.2 | mRNA | upstream | 63240 | 27902972 ~ 27986259 (+) | False | LOC110491776 |
| XM_021565514.2 | mRNA | upstream | 63240 | 27902972 ~ 27986259 (+) | False | LOC110491776 |
| XM_021565518.2 | mRNA | upstream | 63240 | 27902972 ~ 27986259 (+) | False | LOC110491776 |
| XM_021565516.2 | mRNA | upstream | 63240 | 27936790 ~ 27986259 (+) | False | LOC110491776 |
| XM_036946687.1 | mRNA | upstream | 64939 | 27902972 ~ 27984560 (+) | False | LOC110491776 |
| XM_036945853.1 | mRNA | downstream | 178912 | 28260283 ~ 28266022 (+) | True | cabp5a |
| XM_021565535.2 | mRNA | downstream | 197286 | 28278657 ~ 28287808 (+) | False | nif3l1 |
| XM_021565536.2 | mRNA | downstream | 197399 | 28278770 ~ 28287808 (+) | True | nif3l1 |
| XM_021567340.2 | mRNA | downstream | 497998 | 28579369 ~ 28607901 (+) | True | LOC110492866 |
| XM_021565557.2 | mRNA | downstream | 751993 | 28833364 ~ 28857801 (+) | False | si:ch211-214e3.5 |
| TU1552979 | other | upstream | 2109 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1552849 | other | upstream | 103658 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552634 | other | upstream | 472407 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552517 | other | upstream | 717224 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551398 | other | upstream | 1734698 | 26311696 ~ 26314801 (+) | True | mpp3b |
| TU1555703 | other | downstream | 1721283 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 1862070 | 29943441 ~ 29943756 (+) | True | G1361671 |
| TU1557278 | other | downstream | 2622276 | 30703647 ~ 30704108 (+) | True | LOC110492869 |
| TU1557509 | other | downstream | 2873238 | 30954609 ~ 30955975 (+) | True | G1362902 |
| TU1558037 | other | downstream | 3153122 | 31234493 ~ 31235386 (+) | True | G1363401 |
