Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021565553.2 |
| length | 1641 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 7 |
| gene id | LOC110491790 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28535317 ~ 28540645 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006096 | glycolytic process | biological_process |
| GO:0004332 | fructose-bisphosphate aldolase activity | molecular_function |
| id | description |
|---|---|
| K01623 | ALDO; fructose-bisphosphate aldolase, class I |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1554320 | lncRNA | downstream | 34076 | 28492426 ~ 28501241 (-) | True | G1359890 |
| TU1554325 | lncRNA | downstream | 62088 | 28472188 ~ 28473229 (-) | True | G1359895 |
| TU1554329 | lncRNA | downstream | 65535 | 28469532 ~ 28469782 (-) | True | G1359899 |
| TU1554226 | lncRNA | downstream | 221910 | 28274766 ~ 28313407 (-) | True | G1359812 |
| TU1554185 | lncRNA | downstream | 357761 | 28177272 ~ 28177556 (-) | True | G1359773 |
| TU1554404 | lncRNA | upstream | 7635 | 28548280 ~ 28548519 (-) | True | G1359974 |
| TU1554406 | lncRNA | upstream | 9110 | 28549755 ~ 28549981 (-) | True | G1359976 |
| TU1554407 | lncRNA | upstream | 11240 | 28551885 ~ 28552455 (-) | True | G1359977 |
| TU1554319 | lncRNA | upstream | 19671 | 28560316 ~ 28567880 (-) | True | G1359889 |
| TU1554429 | lncRNA | upstream | 57721 | 28598366 ~ 28598608 (-) | True | G1359999 |
| XM_021565550.2 | mRNA | downstream | 1140 | 28478779 ~ 28534177 (-) | True | LOC110491788 |
| XM_021565552.2 | mRNA | downstream | 3035 | 28478779 ~ 28532282 (-) | False | LOC110491788 |
| XM_036946697.1 | mRNA | downstream | 88646 | 28388779 ~ 28446671 (-) | False | si:ch211-180a12.2 |
| XM_036946698.1 | mRNA | downstream | 88646 | 28388779 ~ 28446671 (-) | True | si:ch211-180a12.2 |
| XM_021565544.2 | mRNA | downstream | 165973 | 28298253 ~ 28369344 (-) | False | eif3c |
| XM_036946703.1 | mRNA | upstream | 85487 | 28626132 ~ 28764615 (-) | False | afap1l2 |
| XM_036946700.1 | mRNA | upstream | 85487 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946701.1 | mRNA | upstream | 85487 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946702.1 | mRNA | upstream | 85487 | 28626132 ~ 28767001 (-) | False | afap1l2 |
| XR_005036500.1 | mRNA | upstream | 85487 | 28626132 ~ 28767002 (-) | True | afap1l2 |
| TU1554186 | other | downstream | 354377 | 28177715 ~ 28180940 (-) | True | taok2b |
| TU1554168 | other | downstream | 371090 | 28163463 ~ 28164227 (-) | True | G1359763 |
| TU1553783 | other | downstream | 1007180 | 27527163 ~ 27528137 (-) | True | G1359412 |
| TU1553687 | other | downstream | 1175755 | 27357284 ~ 27359562 (-) | True | G1359321 |
| TU1553462 | other | downstream | 1421916 | 27112234 ~ 27113401 (-) | True | G1359119 |
| TU1555797 | other | upstream | 956468 | 29497113 ~ 29497555 (-) | True | G1361290 |
| TU1556170 | other | upstream | 1383226 | 29923871 ~ 29925154 (-) | True | G1361619 |
| TU1558520 | other | upstream | 3098792 | 31639437 ~ 31650697 (-) | True | G1363836 |
| TU1558829 | other | upstream | 3345104 | 31885749 ~ 31886112 (-) | True | G1364105 |
| TU1559113 | other | upstream | 3478149 | 32018794 ~ 32019498 (-) | True | G1364348 |
