Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1554648 |
| length | 322 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | si:ch211-214e3.5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28833364 ~ 28857801 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1554670 | lncRNA | upstream | 4326 | 28851919 ~ 28852152 (+) | True | G1360236 |
| TU1554669 | lncRNA | upstream | 6234 | 28849588 ~ 28850244 (+) | True | G1360235 |
| TU1554667 | lncRNA | upstream | 7224 | 28848645 ~ 28849254 (+) | True | G1360233 |
| TU1554658 | lncRNA | upstream | 8719 | 28847552 ~ 28847759 (+) | True | G1360227 |
| TU1554657 | lncRNA | upstream | 9013 | 28847129 ~ 28847465 (+) | True | G1360226 |
| TU1554672 | lncRNA | downstream | 7910 | 28864709 ~ 28865439 (+) | True | G1360238 |
| TU1554678 | lncRNA | downstream | 16254 | 28873053 ~ 28873278 (+) | True | G1360243 |
| TU1554680 | lncRNA | downstream | 21515 | 28878314 ~ 28878528 (+) | True | G1360245 |
| TU1554683 | lncRNA | downstream | 24755 | 28881554 ~ 28881868 (+) | True | G1360248 |
| TU1554684 | lncRNA | downstream | 25891 | 28882690 ~ 28883403 (+) | False | G1360249 |
| XM_021567340.2 | mRNA | upstream | 248577 | 28579369 ~ 28607901 (+) | True | LOC110492866 |
| XM_021565535.2 | mRNA | upstream | 568670 | 28278657 ~ 28287808 (+) | False | nif3l1 |
| XM_021565536.2 | mRNA | upstream | 568670 | 28278770 ~ 28287808 (+) | True | nif3l1 |
| XM_036945853.1 | mRNA | upstream | 590456 | 28260283 ~ 28266022 (+) | True | cabp5a |
| XM_021565525.2 | mRNA | upstream | 775107 | 28049499 ~ 28081371 (+) | True | pagr1 |
| XM_021565559.2 | mRNA | downstream | 68018 | 28924817 ~ 29353460 (+) | True | nrg3b |
| XM_036946708.1 | mRNA | downstream | 567542 | 29424341 ~ 29480114 (+) | True | LOC110491795 |
| XM_021564413.2 | mRNA | downstream | 624845 | 29481644 ~ 29492902 (+) | False | irf3 |
| NM_001257262.1 | mRNA | downstream | 624925 | 29481724 ~ 29492457 (+) | True | irf3 |
| XR_005036501.1 | mRNA | downstream | 646610 | 29503409 ~ 29511609 (+) | False | LOC110491796 |
| TU1552979 | other | upstream | 809088 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1552849 | other | upstream | 910637 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552634 | other | upstream | 1279386 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552517 | other | upstream | 1524203 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551398 | other | upstream | 2541677 | 26311696 ~ 26314801 (+) | True | mpp3b |
| TU1555703 | other | downstream | 945855 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 1086642 | 29943441 ~ 29943756 (+) | True | G1361671 |
| TU1557278 | other | downstream | 1846848 | 30703647 ~ 30704108 (+) | True | LOC110492869 |
| TU1557509 | other | downstream | 2097810 | 30954609 ~ 30955975 (+) | True | G1362902 |
| TU1558037 | other | downstream | 2377694 | 31234493 ~ 31235386 (+) | True | G1363401 |
