Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021565564.2 |
| length | 2718 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 4 |
| gene id | LOC110491799 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 29714278 ~ 29727319 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K24491 | LRIT; leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1555598 | lncRNA | upstream | 57610 | 29656461 ~ 29656668 (+) | True | G1361114 |
| TU1555519 | lncRNA | upstream | 64054 | 29629148 ~ 29650224 (+) | False | G1361046 |
| TU1555521 | lncRNA | upstream | 64054 | 29629148 ~ 29650224 (+) | False | G1361046 |
| TU1555523 | lncRNA | upstream | 64054 | 29629148 ~ 29650224 (+) | False | G1361046 |
| TU1555517 | lncRNA | upstream | 64054 | 29646943 ~ 29650224 (+) | False | G1361046 |
| TU1555641 | lncRNA | downstream | 13432 | 29740751 ~ 29741079 (+) | True | G1361155 |
| TU1556059 | lncRNA | downstream | 98194 | 29825513 ~ 29825718 (+) | True | G1361517 |
| TU1556066 | lncRNA | downstream | 101251 | 29828570 ~ 29828796 (+) | True | G1361524 |
| TU1556071 | lncRNA | downstream | 105641 | 29832960 ~ 29833175 (+) | True | G1361529 |
| TU1556136 | lncRNA | downstream | 212835 | 29940154 ~ 29940377 (+) | True | G1361592 |
| XM_021565561.2 | mRNA | upstream | 85267 | 29534042 ~ 29629011 (+) | True | LOC110491797 |
| XR_005036502.1 | mRNA | upstream | 97250 | 29534042 ~ 29617028 (+) | False | LOC110491797 |
| XR_005036501.1 | mRNA | upstream | 202669 | 29503409 ~ 29511609 (+) | False | LOC110491796 |
| XR_002468904.2 | mRNA | upstream | 202669 | 29503710 ~ 29511609 (+) | True | LOC110491796 |
| XM_021564413.2 | mRNA | upstream | 221376 | 29481644 ~ 29492902 (+) | False | irf3 |
| XM_021565565.2 | mRNA | downstream | 49121 | 29776440 ~ 29779141 (+) | True | LOC110491800 |
| XM_021565566.2 | mRNA | downstream | 179973 | 29907292 ~ 29925164 (+) | True | LOC110491801 |
| XM_021565567.2 | mRNA | downstream | 415110 | 30142429 ~ 30144341 (+) | True | LOC110491802 |
| XM_036945881.1 | mRNA | downstream | 872075 | 30599394 ~ 30658325 (+) | True | LOC110491805 |
| LOC110492869 | mRNA | downstream | 973680 | 30700999 ~ 30704172 (+) | False | LOC110492869 |
| TU1552979 | other | upstream | 1666888 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1552849 | other | upstream | 1768437 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552634 | other | upstream | 2137186 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552517 | other | upstream | 2382003 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551398 | other | upstream | 3399477 | 26311696 ~ 26314801 (+) | True | mpp3b |
| TU1555703 | other | downstream | 75335 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 216122 | 29943441 ~ 29943756 (+) | True | G1361671 |
| TU1557278 | other | downstream | 976328 | 30703647 ~ 30704108 (+) | True | LOC110492869 |
| TU1557509 | other | downstream | 1227290 | 30954609 ~ 30955975 (+) | True | G1362902 |
| TU1558037 | other | downstream | 1507174 | 31234493 ~ 31235386 (+) | True | G1363401 |
