Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005036393.1 |
| length | 819 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC118939474 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 40238087 ~ 40239129 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0030953 | astral microtubule organization | biological_process |
| GO:0007507 | heart development | biological_process |
| GO:0045766 | positive regulation of angiogenesis | biological_process |
| GO:0090307 | mitotic spindle assembly | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0001570 | vasculogenesis | biological_process |
| GO:0007058 | spindle assembly involved in female meiosis II | biological_process |
| GO:0007080 | mitotic metaphase plate congression | biological_process |
| GO:0051311 | meiotic metaphase plate congression | biological_process |
| GO:0043523 | regulation of neuron apoptotic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1569306 | lncRNA | downstream | 8378 | 40229453 ~ 40229709 (-) | True | G1373656 |
| TU1569305 | lncRNA | downstream | 10647 | 40227040 ~ 40227440 (-) | True | G1373655 |
| TU1569286 | lncRNA | downstream | 58899 | 40176810 ~ 40179188 (-) | False | G1373637 |
| TU1569287 | lncRNA | downstream | 58899 | 40176810 ~ 40179188 (-) | True | G1373637 |
| TU1569269 | lncRNA | downstream | 93837 | 40144042 ~ 40144250 (-) | True | G1373621 |
| TU1569336 | lncRNA | upstream | 52843 | 40291972 ~ 40350960 (-) | True | G1373685 |
| TU1569343 | lncRNA | upstream | 125428 | 40364557 ~ 40377173 (-) | False | G1373689 |
| TU1569342 | lncRNA | upstream | 133219 | 40372348 ~ 40377173 (-) | True | G1373689 |
| TU1569371 | lncRNA | upstream | 140752 | 40379881 ~ 40380133 (-) | True | G1373717 |
| TU1569377 | lncRNA | upstream | 144331 | 40383460 ~ 40383681 (-) | True | G1373723 |
| XM_021565854.2 | mRNA | downstream | 24673 | 40209982 ~ 40213414 (-) | True | neurod4 |
| XM_021565848.2 | mRNA | downstream | 44081 | 40181926 ~ 40194006 (-) | False | LOC110491955 |
| XM_021565849.2 | mRNA | downstream | 44081 | 40181926 ~ 40194006 (-) | True | LOC110491955 |
| XM_021565851.2 | mRNA | downstream | 45605 | 40181926 ~ 40192482 (-) | False | LOC110491955 |
| XM_021565852.2 | mRNA | downstream | 45606 | 40181926 ~ 40192481 (-) | False | LOC110491955 |
| XM_021565856.2 | mRNA | upstream | 196929 | 40436058 ~ 40443364 (-) | False | LOC110491958 |
| XR_002468933.2 | mRNA | upstream | 196929 | 40436058 ~ 40443364 (-) | False | LOC110491958 |
| XM_021565860.2 | mRNA | upstream | 220701 | 40459830 ~ 40480813 (-) | True | slc26a10 |
| XM_036946877.1 | mRNA | upstream | 288798 | 40527927 ~ 40614259 (-) | False | arhgef25a |
| XM_036946874.1 | mRNA | upstream | 288798 | 40527927 ~ 40656366 (-) | False | arhgef25a |
| TU1569212 | other | downstream | 153261 | 40082457 ~ 40084826 (-) | True | LOC110491948 |
| TU1569124 | other | downstream | 295059 | 39940222 ~ 39943028 (-) | True | G1373490 |
| TU1569001 | other | downstream | 517110 | 39719864 ~ 39720977 (-) | True | G1373378 |
| TU1568834 | other | downstream | 702788 | 39529924 ~ 39535299 (-) | True | G1373226 |
| TU1568802 | other | downstream | 815235 | 39422150 ~ 39422852 (-) | True | G1373200 |
| TU1569967 | other | upstream | 283868 | 40522997 ~ 40525278 (-) | False | G1374237 |
| TU1569961 | other | upstream | 283930 | 40523059 ~ 40525278 (-) | False | G1374237 |
| TU1569962 | other | upstream | 283965 | 40523094 ~ 40525278 (-) | False | G1374237 |
| TU1570054 | other | upstream | 613629 | 40852758 ~ 40854589 (-) | True | rps26 |
| TU1570242 | other | upstream | 787646 | 41026775 ~ 41029406 (-) | True | G1374491 |
