RNA id: XM_021565898.2


Basic Information

Item Value
RNA id XM_021565898.2
length 2699
RNA type mRNA
GC content 0.51
exon number 3
gene id mfsd5
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 41249937 ~ 41253783 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGTCTGACCGCACCATCAGTATAGAGAAAGGCTGCCGCTCAGTGGTCAAGTTGAAAAGAGAACTGCAGCAAAACCCGGAAGTTGAAGGAGGATGTTGTTGTAGAGCGCGGTTTATCGTACTTCgaagctagctatctagctaattcCGTTCTTATTGATTTTAACACGACTTTGAGTATGTAAAGTGGTATGATGCGAGTATCAAACAAGATGCCTTTGATTAATCCTCCTAGGGCTACAAGACCGGAGTGAATAGACCTCCCTCATCCCAACAGTGTCACTTGGACAAACTCACCATGTTGGTGACAGCCTACCTGGCCATCGTGGTCCTACTGGCGCTATGTGTCGGTCTGGAGCTCACGGCACGTCGCCTCACCGCGCCTCAACCCACTCCCTCTGCTGTGGGCACCAACCCTGCTTTCCGCCGCTTCCAGACCCTGTTCCTAAGAGGCTACCTCCTAGCCCTGTGGGCTGACTGGCTGCAGGGGCCATACCTCTACAAGCTGTACCGTCACTACAGCTTCCTGGAGTCCCAGATAGCCATCCTGTATGTTGTTGGTCTGGCCTCCTGTGTGCTGTTTGCCCCCGTGGCTGGCTGGCTCCCTCAGGTCCTGGGGCGCAGACAGACCTGCCTGCTCTTCTGCGTAGCCTACTCAGCCTGTTGCCTCACCAAGCTATCCCGTGACTACTTTGTCCTTATCGTGGGTCGCATGCTAGGGGGCCTGTCCACCTCTCTGCTCTCCACAGCCTTCGAGGCCTGGTACGTGCATCGACATGTGAACGCCCACGACTTCCCTAAAGAATGGATCCCCAGCACCTTCACCAAGGCTGCTAGCTGGAACCACGGGCTGGCAGTGGGGGCTGGGCTGGTGGCTAACATGCTGGCTGAGTGGCTCCACCTGGGGCCTGTGGCTCCCTTCCTCCTGGCTGTGCCCTGCCTGGGGGCCTGTGGCTGGGTGGTGCTGACTGACTGGGGCACGGAGGAGAAGGGAGGCCAGGAGAGGGACAAGACGTCCTTGCTTGGTCCTGCTGCTTCAGTGCCCCTGGCCCGGGCATCAGCACGGGCCCGGTTCTGGCGCAGCTGTCAGGAATGTCTCCGCTGTCTGTTATCAGACAGACGGGTGATGCTGCTAGGAGGTGTCCAAGCTCTGTTTGAGAGTGTACTTTATATATTTGTCTTCCTGTGGACCCCGGTCCTGGACCCCCACGGCCCTCCGCTGGGCATTGTCTTCTCCTGCCTGATGGCAGCCAGTATGGCTGGGTCCCTGCTCTACCGCCTGGCCACATCCACCCGCTACCGCCTCCAGCCTGGTCACCTCCTCTGCTTCTCCATGCTGCTTGCATTTTTCTCCTTCTTCATGCTTATCTTCTCCACTGCCCCGGGCCAGCCCAGACCCCGCGAGTCCCTGCTGGCCTTCCTGCTGCTGGAGCTGGCCAGTGGCCTCTACTTCCCCGCTGTCAGCTTCCTCCAGGGGAGGGTGATCCCGGAGGAGAAGAGGGCCGGGGTGCTGGCCTGGTTCAGGCTGCCTCTGCACCTTCTGGCCTGCCTGGGGCTCCTGGCGCTCCATGGAGAAGTGTCTGGGACTGGAGGGGGTGAGAGTGGTAGTGGAACTAGAAACATGTTTGGGGGCTGTGCTGTTATGATGCTAGCTGCACTCTTGGCTGTGGTTAGTCTCTTTACTCTGGGAAGGAATGATGTGGATCTCAGACTAGAGGGGCccaaaggagagggagagatatgacATTCAGAGGTCTTTATTGTCCCAACAATGACTTGGAATACAGTTACTGCTTTGTTGACAGATGAAGACTCGTTTGGGAAAGTAAAATGAGCTTTTGAGGGACTGAAACCTGACATTTAATCAACCTAGGATTTACCAATATTAGACAATGATTTAAAATAATCTGGTGTCGGTAAGGTTACAAGATTTCCTGATATTTATTCGTTTTCGTTTTGTTAACAGGGACTAGCAATTGTTTCGCTATATTGTTGGGTATATGAAGAAAAATATGTTCTTAAGTTATAATGCTGCAGTCTGCGTCATCTCCCTTCTTTTGAAGCACACTTGCATACACACTGACGCACATGCTGGTGTAATAATGTTGTGCCAGTAGGTGGTGCCAGTCTTGCTCCAGGATGTTCTTCATATTCTAGCCTGTACATGCTGTAGTGTTTATCAACTGCGTTGTTCAGGGTGTACCACTCAGCCACAGCAGAACGGGGCTTACATCACTAGCCCAGCTGCTCGCTTCGGCAGAACTATCACCCACTCTCATATCATTTAAAACAAGTACAAATATATCAATTCAGTCTTACTGCTTATGATGAAAGCAACTGTGAAGTCAATCAGTGGGCATGTGTAGCTACACTTGTTCTTGACATTGTCAGTAGTGTCCAAAAGGGGGGGAAAAATATTATAAATAGCTTGTTGTGTGGATGAATATCGGGGCCATTCCATTATCAATGCCTGTTTTGGTATACAAACAGTTGCTATTTTGACTTATGGGGCTTGCTAGGTACATTGTAGTAATTAAACACCAATGTTAAGGGTGTTTAGATTCTGAATGGATACTTAATGTgtcttggagaggtgtgtgtgtgtgtatttgccttGTTCTTTTTCGCTTTCTATTCTCCAGAACCTTCAGTAAAATAGGACATATTGTAAATATGGAATAAATGTGATTTTAATACCGTC

Function

GO: NA

KEGG:

id description
K24175 MFSD5; MFS transporter, MFS domain-containing protein family, molybdate-anion transporter

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1570438 lncRNA downstream 8151 41185859 ~ 41241786 (-) True G1374672
TU1570437 lncRNA downstream 8765 41184380 ~ 41241172 (-) True G1374671
TU1570156 lncRNA downstream 364889 40884836 ~ 40885048 (-) True G1374414
TU1570148 lncRNA downstream 385227 40864425 ~ 40864710 (-) True G1374406
TU1570070 lncRNA downstream 398208 40851276 ~ 40851729 (-) True G1374328
TU1570471 lncRNA upstream 3620 41257403 ~ 41259375 (-) True G1374704
TU1570530 lncRNA upstream 63397 41317180 ~ 41318652 (-) False G1374755
TU1570531 lncRNA upstream 63397 41317180 ~ 41318652 (-) True G1374755
TU1570569 lncRNA upstream 110150 41363933 ~ 41400154 (-) True G1374790
TU1570632 lncRNA upstream 202603 41456386 ~ 41456611 (-) True G1374850
XM_021565901.2 mRNA downstream 1898 41242965 ~ 41248039 (-) True LOC110491989
XM_021565900.2 mRNA downstream 1900 41242965 ~ 41248037 (-) False LOC110491989
XM_021565896.2 mRNA downstream 9627 41230602 ~ 41240310 (-) True LOC110491986
XM_036946892.1 mRNA downstream 71599 41038562 ~ 41178338 (-) True LOC110491981
XM_036946893.1 mRNA downstream 71600 41038562 ~ 41178337 (-) False LOC110491981
XM_021565897.2 mRNA upstream 9047 41262830 ~ 41278997 (-) True LOC110491987
XM_036946910.1 mRNA upstream 131803 41385586 ~ 41395379 (-) False calcoco1a
XM_036946909.1 mRNA upstream 131803 41385586 ~ 41395668 (-) True calcoco1a
XM_036946915.1 mRNA upstream 384054 41637837 ~ 41645221 (-) True cbx5
XM_021565933.2 mRNA upstream 395414 41649197 ~ 41657737 (-) True nfe2
TU1570242 other downstream 220531 41026775 ~ 41029406 (-) True G1374491
TU1570054 other downstream 395348 40852758 ~ 40854589 (-) True rps26
TU1569967 other downstream 724659 40522997 ~ 40525278 (-) False G1374237
TU1571388 other upstream 409965 41663748 ~ 41664049 (-) True G1375495
TU1571475 other upstream 600997 41854780 ~ 41855361 (-) True LOC110492013
TU1572034 other upstream 1299776 42553559 ~ 42569326 (-) True LOC110492054
TU1572237 other upstream 1518523 42772306 ~ 42773296 (-) True LOC110492059
TU1572712 other upstream 1865105 43118888 ~ 43124166 (-) True LOC110491060

Expression Profile