Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1582553 |
| length | 220 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 1 |
| gene id | LOC110491089 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51041123 ~ 51043794 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1582535 | lncRNA | downstream | 11542 | 51029981 ~ 51031903 (-) | True | mad2l2 |
| TU1582514 | lncRNA | downstream | 28030 | 51015073 ~ 51015415 (-) | True | G1385592 |
| TU1582513 | lncRNA | downstream | 28486 | 51014722 ~ 51014959 (-) | True | G1385591 |
| TU1582512 | lncRNA | downstream | 29667 | 51013544 ~ 51013778 (-) | True | G1385590 |
| TU1582509 | lncRNA | downstream | 33396 | 51009812 ~ 51010049 (-) | True | G1385587 |
| TU1582558 | lncRNA | upstream | 4402 | 51048066 ~ 51048380 (-) | True | G1385634 |
| TU1582589 | lncRNA | upstream | 28202 | 51071866 ~ 51072238 (-) | True | G1385665 |
| TU1582983 | lncRNA | upstream | 261830 | 51305494 ~ 51340532 (-) | True | G1386030 |
| TU1583018 | lncRNA | upstream | 317701 | 51361365 ~ 51362050 (-) | True | G1386059 |
| TU1583019 | lncRNA | upstream | 333048 | 51376712 ~ 51384868 (-) | True | G1386060 |
| XM_021566314.2 | mRNA | downstream | 11526 | 51021456 ~ 51031919 (-) | False | mad2l2 |
| XM_021566309.2 | mRNA | downstream | 724672 | 50314916 ~ 50318773 (-) | True | LOC110492208 |
| XM_036947162.1 | mRNA | downstream | 1072152 | 49950665 ~ 49971293 (-) | True | itchb |
| XM_036947163.1 | mRNA | downstream | 1072153 | 49950665 ~ 49971292 (-) | False | itchb |
| XM_036947161.1 | mRNA | downstream | 1072154 | 49950665 ~ 49971291 (-) | False | itchb |
| LOC110491090 | mRNA | upstream | 33114 | 51076778 ~ 51077359 (-) | True | LOC110491090 |
| XM_021566315.2 | mRNA | upstream | 58119 | 51101783 ~ 51103933 (-) | True | LOC110492214 |
| XM_021566317.2 | mRNA | upstream | 69927 | 51113591 ~ 51117843 (-) | False | dffb |
| XM_021566316.2 | mRNA | upstream | 69927 | 51113591 ~ 51117850 (-) | False | dffb |
| XM_021566322.2 | mRNA | upstream | 478685 | 51522349 ~ 51603970 (-) | True | LOC110492220 |
| TU1581769 | other | downstream | 977628 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1581430 | other | downstream | 1323906 | 49603118 ~ 49719539 (-) | True | LOC110491086 |
| TU1580193 | other | downstream | 1847119 | 49184308 ~ 49196326 (-) | True | LOC110492187 |
| TU1579549 | other | downstream | 2730487 | 48282213 ~ 48312958 (-) | True | G1382894 |
| TU1579359 | other | downstream | 3097223 | 47943379 ~ 47946222 (-) | True | G1382721 |
| TU1582569 | other | upstream | 11967 | 51055631 ~ 51056061 (-) | True | G1385645 |
| TU1582822 | other | upstream | 46981 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1582837 | other | upstream | 69739 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1583828 | other | upstream | 939470 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1585179 | other | upstream | 1375212 | 52418876 ~ 52428759 (-) | True | spen |
