Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036947331.1 |
| length | 1280 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 12 |
| gene id | LOC110492339 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55633814 ~ 55638471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K14298 | RAE1, GLE2; mRNA export factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1588385 | lncRNA | downstream | 20307 | 55602174 ~ 55613967 (-) | True | G1390797 |
| TU1588364 | lncRNA | downstream | 53373 | 55580207 ~ 55580901 (-) | True | G1390777 |
| TU1588359 | lncRNA | downstream | 58971 | 55574956 ~ 55575303 (-) | True | G1390772 |
| TU1588358 | lncRNA | downstream | 59466 | 55574529 ~ 55574808 (-) | True | G1390771 |
| TU1588330 | lncRNA | downstream | 66477 | 55566446 ~ 55567797 (-) | True | G1390745 |
| TU1588406 | lncRNA | upstream | 28036 | 55666507 ~ 55666872 (-) | True | G1390817 |
| TU1588407 | lncRNA | upstream | 28657 | 55667128 ~ 55667643 (-) | True | G1390818 |
| TU1588431 | lncRNA | upstream | 76771 | 55715242 ~ 55715658 (-) | True | G1390841 |
| TU1588435 | lncRNA | upstream | 81061 | 55719532 ~ 55719754 (-) | True | G1390845 |
| TU1588440 | lncRNA | upstream | 89044 | 55727515 ~ 55727835 (-) | True | G1390850 |
| XM_021566575.2 | mRNA | downstream | 1369 | 55626915 ~ 55632905 (-) | True | LOC110492341 |
| XM_021566568.2 | mRNA | downstream | 7539 | 55609187 ~ 55626735 (-) | True | LOC110492338 |
| XM_021566567.2 | mRNA | downstream | 7607 | 55609187 ~ 55626667 (-) | False | LOC110492338 |
| XM_021566570.2 | mRNA | downstream | 9963 | 55609187 ~ 55624311 (-) | False | LOC110492338 |
| XM_021566566.2 | mRNA | downstream | 26950 | 55595569 ~ 55607324 (-) | True | LOC110492337 |
| XM_021566577.2 | mRNA | upstream | 7674 | 55646145 ~ 55649413 (-) | False | LOC110492342 |
| XM_021566578.2 | mRNA | upstream | 7674 | 55646145 ~ 55649415 (-) | True | LOC110492342 |
| XM_021564388.2 | mRNA | upstream | 32993 | 55671464 ~ 55679618 (-) | False | LOC100170209 |
| NM_001129988.2 | mRNA | upstream | 34314 | 55672785 ~ 55692812 (-) | True | LOC100170209 |
| XM_021566582.2 | mRNA | upstream | 103797 | 55742268 ~ 55745483 (-) | False | LOC110492344 |
| TU1587517 | other | downstream | 648011 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1587231 | other | downstream | 1089031 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 1901359 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 2601353 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 3061967 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1588497 | other | upstream | 185688 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 426032 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 586943 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 642581 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
| TU1589476 | other | upstream | 785801 | 56424272 ~ 56437279 (-) | False | G1391796 |
