Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1588376 |
| length | 406 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC110492344 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 55742140 ~ 55745483 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1588446 | lncRNA | downstream | 8916 | 55733173 ~ 55733373 (-) | True | G1390856 |
| TU1588445 | lncRNA | downstream | 10799 | 55731238 ~ 55731490 (-) | True | G1390855 |
| TU1588444 | lncRNA | downstream | 11212 | 55730805 ~ 55731077 (-) | True | G1390854 |
| TU1588443 | lncRNA | downstream | 12362 | 55729706 ~ 55729927 (-) | True | G1390853 |
| TU1588440 | lncRNA | downstream | 14454 | 55727515 ~ 55727835 (-) | True | G1390850 |
| TU1588452 | lncRNA | upstream | 1011 | 55746277 ~ 55746515 (-) | True | G1390862 |
| TU1588453 | lncRNA | upstream | 1782 | 55747048 ~ 55747489 (-) | True | G1390863 |
| TU1588463 | lncRNA | upstream | 30887 | 55776153 ~ 55777082 (-) | True | G1390873 |
| TU1588467 | lncRNA | upstream | 35980 | 55781246 ~ 55781400 (-) | True | G1390877 |
| TU1588466 | lncRNA | upstream | 36263 | 55781529 ~ 55781881 (-) | True | G1390876 |
| NM_001129988.2 | mRNA | downstream | 49477 | 55672785 ~ 55692812 (-) | True | LOC100170209 |
| XM_021564388.2 | mRNA | downstream | 62671 | 55671464 ~ 55679618 (-) | False | LOC100170209 |
| XM_021566578.2 | mRNA | downstream | 92874 | 55646145 ~ 55649415 (-) | True | LOC110492342 |
| XM_021566577.2 | mRNA | downstream | 92876 | 55646145 ~ 55649413 (-) | False | LOC110492342 |
| XM_036947331.1 | mRNA | downstream | 103818 | 55634274 ~ 55638471 (-) | True | LOC110492339 |
| XM_021566584.2 | mRNA | upstream | 9864 | 55755130 ~ 55769029 (-) | True | LOC110492346 |
| XM_021566585.2 | mRNA | upstream | 38542 | 55783808 ~ 55787739 (-) | True | LOC110492348 |
| XM_021566592.2 | mRNA | upstream | 78889 | 55824155 ~ 55826646 (-) | False | LOC110492352 |
| XM_021566593.2 | mRNA | upstream | 99419 | 55844685 ~ 55847496 (-) | False | LOC110492353 |
| XM_036947334.1 | mRNA | upstream | 140117 | 55885383 ~ 55888359 (-) | True | LOC110492354 |
| TU1587517 | other | downstream | 756026 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1587231 | other | downstream | 1197046 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1585952 | other | downstream | 2009374 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1585503 | other | downstream | 2709368 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585247 | other | downstream | 3169982 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1588497 | other | upstream | 78893 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
| TU1589255 | other | upstream | 319237 | 56064503 ~ 56064862 (-) | True | G1391586 |
| TU1589295 | other | upstream | 480148 | 56225414 ~ 56226061 (-) | True | G1391624 |
| TU1589358 | other | upstream | 535786 | 56281052 ~ 56293472 (-) | True | LOC110492371 |
| TU1589476 | other | upstream | 679006 | 56424272 ~ 56437279 (-) | False | G1391796 |
