Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1592620 |
| length | 758 |
| lncRNA type | sense_over |
| GC content | 0.51 |
| exon number | 4 |
| gene id | LOC110492420 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58886676 ~ 58896965 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1592404 | lncRNA | downstream | 7007 | 58879387 ~ 58879857 (-) | True | G1394450 |
| TU1592401 | lncRNA | downstream | 8585 | 58878052 ~ 58878279 (-) | True | G1394447 |
| TU1592349 | lncRNA | downstream | 59704 | 58826797 ~ 58827160 (-) | True | G1394399 |
| TU1592340 | lncRNA | downstream | 73863 | 58812747 ~ 58813001 (-) | True | G1394390 |
| TU1592334 | lncRNA | downstream | 80340 | 58806312 ~ 58806524 (-) | True | G1394384 |
| TU1592635 | lncRNA | upstream | 7369 | 58904325 ~ 58904573 (-) | True | G1394656 |
| TU1592650 | lncRNA | upstream | 36085 | 58933041 ~ 58935197 (-) | True | G1394670 |
| TU1592654 | lncRNA | upstream | 48987 | 58945943 ~ 58998411 (-) | True | G1394673 |
| TU1592679 | lncRNA | upstream | 85865 | 58982821 ~ 58988799 (-) | False | G1394696 |
| TU1592682 | lncRNA | upstream | 85865 | 58982821 ~ 58988799 (-) | True | G1394696 |
| XM_036947394.1 | mRNA | downstream | 9362 | 58871749 ~ 58877502 (-) | True | LOC118939563 |
| XM_021566729.2 | mRNA | downstream | 16073 | 58865549 ~ 58870791 (-) | True | LOC110492419 |
| XM_021564479.2 | mRNA | downstream | 39807 | 58836641 ~ 58847057 (-) | False | LOC110491124 |
| LOC110491123 | mRNA | downstream | 156525 | 58675738 ~ 58730339 (-) | True | LOC110491123 |
| XM_021566725.2 | mRNA | downstream | 219034 | 58423353 ~ 58667830 (-) | True | LOC110492417 |
| XM_036947397.1 | mRNA | upstream | 122948 | 59019904 ~ 59026126 (-) | False | LOC118939564 |
| XR_002469001.2 | mRNA | upstream | 278978 | 59175934 ~ 59206144 (-) | False | LOC110492425 |
| XR_002469002.2 | mRNA | upstream | 278978 | 59175934 ~ 59206144 (-) | False | LOC110492425 |
| XM_036947401.1 | mRNA | upstream | 283367 | 59180323 ~ 59187309 (-) | False | LOC110492425 |
| XM_021566739.2 | mRNA | upstream | 283367 | 59180323 ~ 59206144 (-) | True | LOC110492425 |
| TU1592300 | other | downstream | 39848 | 58838756 ~ 58847016 (-) | True | LOC110491124 |
| TU1592280 | other | downstream | 139565 | 58746870 ~ 58747299 (-) | True | G1394341 |
| TU1591975 | other | downstream | 458751 | 58424458 ~ 58428113 (-) | True | G1394067 |
| TU1591868 | other | downstream | 580223 | 58302511 ~ 58306641 (-) | True | LOC110492410 |
| TU1591894 | other | downstream | 608437 | 58274028 ~ 58278427 (-) | True | G1393997 |
| TU1592757 | other | upstream | 214416 | 59111372 ~ 59112897 (-) | True | G1394768 |
| TU1593009 | other | upstream | 457244 | 59354200 ~ 59356849 (-) | True | G1394978 |
| TU1594716 | other | upstream | 1657800 | 60554756 ~ 60582035 (-) | False | G1396467 |
| TU1594714 | other | upstream | 1660082 | 60557038 ~ 60582035 (-) | True | G1396467 |
| TU1594786 | other | upstream | 1764600 | 60661556 ~ 60663516 (-) | False | LOC118939463 |
