Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1593329 |
| length | 315 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | plxnd1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 59413470 ~ 59538798 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1593106 | lncRNA | downstream | 9705 | 59399488 ~ 59404307 (-) | True | G1395053 |
| TU1593065 | lncRNA | downstream | 80896 | 59331057 ~ 59333116 (-) | True | G1395015 |
| TU1593061 | lncRNA | downstream | 81029 | 59331057 ~ 59332983 (-) | False | G1395015 |
| TU1593036 | lncRNA | downstream | 108258 | 59305455 ~ 59305754 (-) | True | G1394999 |
| TU1593034 | lncRNA | downstream | 111220 | 59302351 ~ 59302792 (-) | True | G1394997 |
| TU1593355 | lncRNA | upstream | 42669 | 59456995 ~ 59457801 (-) | True | G1395255 |
| TU1593363 | lncRNA | upstream | 62142 | 59476468 ~ 59477513 (-) | True | G1395262 |
| TU1593435 | lncRNA | upstream | 183969 | 59598295 ~ 59599966 (-) | False | G1395330 |
| TU1593442 | lncRNA | upstream | 183969 | 59598295 ~ 59601453 (-) | True | G1395330 |
| TU1593453 | lncRNA | upstream | 227894 | 59642220 ~ 59642533 (-) | True | G1395340 |
| XR_002469001.2 | mRNA | downstream | 207868 | 59175934 ~ 59206144 (-) | False | LOC110492425 |
| XR_002469002.2 | mRNA | downstream | 207868 | 59175934 ~ 59206144 (-) | False | LOC110492425 |
| XM_021566739.2 | mRNA | downstream | 207868 | 59180323 ~ 59206144 (-) | True | LOC110492425 |
| XM_036947401.1 | mRNA | downstream | 226703 | 59180323 ~ 59187309 (-) | False | LOC110492425 |
| XM_036947397.1 | mRNA | downstream | 387886 | 59019904 ~ 59026126 (-) | False | LOC118939564 |
| XM_036947419.1 | mRNA | upstream | 25232 | 59439558 ~ 59538798 (-) | False | plxnd1 |
| XM_036947427.1 | mRNA | upstream | 127061 | 59541387 ~ 59559459 (-) | False | LOC110492431 |
| XM_036947425.1 | mRNA | upstream | 127061 | 59541387 ~ 59569190 (-) | False | LOC110492431 |
| XM_036947424.1 | mRNA | upstream | 127061 | 59541387 ~ 59604857 (-) | False | LOC110492431 |
| XM_036947426.1 | mRNA | upstream | 127061 | 59541387 ~ 59604857 (-) | False | LOC110492431 |
| TU1593009 | other | downstream | 57163 | 59354200 ~ 59356849 (-) | True | G1394978 |
| TU1592757 | other | downstream | 301115 | 59111372 ~ 59112897 (-) | True | G1394768 |
| TU1592300 | other | downstream | 566996 | 58838756 ~ 58847016 (-) | True | LOC110491124 |
| TU1592280 | other | downstream | 666713 | 58746870 ~ 58747299 (-) | True | G1394341 |
| TU1591975 | other | downstream | 985899 | 58424458 ~ 58428113 (-) | True | G1394067 |
| TU1594716 | other | upstream | 1140430 | 60554756 ~ 60582035 (-) | False | G1396467 |
| TU1594714 | other | upstream | 1142712 | 60557038 ~ 60582035 (-) | True | G1396467 |
| TU1594786 | other | upstream | 1247230 | 60661556 ~ 60663516 (-) | False | LOC118939463 |
| TU1594806 | other | upstream | 1279283 | 60693609 ~ 60694036 (-) | True | G1396543 |
| TU1594840 | other | upstream | 1338779 | 60753105 ~ 60754871 (-) | True | abhd6b |
