RNA id: XM_021566827.2


Basic Information

Item Value
RNA id XM_021566827.2
length 1756
RNA type mRNA
GC content 0.42
exon number 2
gene id kctd6b
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 60749758 ~ 60752752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ttaggcataaggttagcagtgtggttaagatcAGGGTTATGGTAAGAGTTAGGttttaaatcagattttaagaataTCAATTGTAGgaataggcggggtttatgatTTTGTGGTTGTGGTAACTAATGACTACCCTGTAGCCTGGGCATCGGGAACAGTGGTCGGACACCATTCATCACCTTGCAGCCAACATTGATGAGAGCAAAAATATAAGTCTAGATAGCTTTTAAACGAACATGTAGAATCGATGAAATAATAAGGGTAACCTTTCACATACagATGACTAACCCAGTGACCTTGAATGTGGGGGGCCACCTGTACACCACCTCCCTATCAACCCTGCAGCGGTACCCAGACTCCATGCTGGGCGCCATGTTCCGTGGGGATTTTCCCACAACGCGGGACGCCCAGGGAAACTACTTCATCGACCGCGATGGGACGCTCTTCCGGTACGTGCTGAACTTCCTACGTACGTCCGAGCTCACACTCCCTGTGGACTTCACTGAAACTGACCTCCTGAGGAAGGAGGCGGATTTCTACTTGATCGAACCGTTGATCCATTGCCTCAATGAACCCAAGCCGCTCTACCCTCTGGACATCTTTGAGCAGGTGGTGGAGCTGTCCAGCACACGGAAACTATCCAAGTATTCAAACCCAGTGGCTGTCATTATCACACAGCTCACCATAACAACCAAGGTGCAAGCCCTGCTGGAGGGCATCTGCAAAAATTTCACCAAGTGGAACAAACACATGATGGACACAAGAGACTTTCAGGTGTCCTTCACTTTTGGACCGTGTGACTACCACCAGGAAGTGACCCTCAGGGTTCACCTAATGGACTACATCATGAAGCAGGGCTTCACCATCCGGAACACTCGAGTGCATCACATGAGCGAGCGAGCCAATGAGAATACAGTGGAGCACCACTGGACATTCTGCAGACCGGCTCGCAAAGTAGAAGACTGACTGTGCCACAGCTGTAGTCTATGGAGTCACGTCCATACAGTTTTCATCATCGTCGCTCTCCAACATATTGGCAACATATTGACATTATTATGGTATTGTTGAAAGGAAAAAAAGAAAAGCTGGTTGGTCTGCTTGTAATGAGATTTCATTGCCATGATGATACGAAATCACTGTGTATAAGACAATATCCTATAATAGGTTCGTCCTTCACAATGGAAGAGAGAAGGTGCAAATAAAAAGTGATAGATTCATGCCCTAATACTATAAACACACTTTGATCATGATAATAAATTGATGCATAATAATCAACAGTTCTTCTGTAAATATATGGATACATCTGTCTTATCTGAATGTTAACATTGTTGTCTGTTTAGGCATAAATTGCATATGGTTATGATATCTGCATGGTGCAATTGAGAATCCAGGCATTATTGCATGTTCAATATTAAGTATTATATTTCAACATTCTAGAGCTCATGTCATCAGTGATGTAGTTGGTCTTAGAGCTGGGGGATATGGACAAAAAAACATATCACaataaattgcctgaattgatgcAATAATGATAAATAGCAAGATAAGTTTATAACCATGTGCACCACCATTTAAAAATAtatcctttaaactactactactactactagtttaaTGGTTGaaccatcaattgtcccattaacaatcacccatattagcaaacttatttcatttcaatcgtcacatttctctagtataggccACTTATTTGATCAAATTAGATTTCTTGTAATGAACGATATCAGTAAAATGCTTG

Function

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process

KEGG:

id description
K21916 KCTD6; BTB/POZ domain-containing protein KCTD6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1594814 lncRNA downstream 44192 60705126 ~ 60705566 (-) True G1396551
TU1594813 lncRNA downstream 44770 60704582 ~ 60704988 (-) True G1396550
TU1594812 lncRNA downstream 46148 60703081 ~ 60703610 (-) True G1396549
TU1594811 lncRNA downstream 46767 60702727 ~ 60702991 (-) True G1396548
TU1594810 lncRNA downstream 47589 60701618 ~ 60702169 (-) True G1396547
TU1596089 lncRNA upstream 40020 60792772 ~ 60793052 (-) True G1397641
TU1596113 lncRNA upstream 143162 60895914 ~ 60905557 (-) True G1397662
TU1596115 lncRNA upstream 156636 60909388 ~ 60911920 (-) True G1397663
TU1596111 lncRNA upstream 159222 60911974 ~ 60914109 (-) True G1397660
TU1596273 lncRNA upstream 331281 61084033 ~ 61085092 (-) True G1397784
XR_005036568.1 mRNA downstream 5996 60690268 ~ 60743762 (-) False LOC110492475
XR_005036569.1 mRNA downstream 5998 60690268 ~ 60743760 (-) False LOC110492475
XM_021566824.2 mRNA downstream 6010 60710026 ~ 60743748 (-) False LOC110492475
XM_036947485.1 mRNA downstream 9048 60710026 ~ 60740710 (-) False LOC110492475
XM_036947486.1 mRNA downstream 24520 60710026 ~ 60725238 (-) False LOC110492475
XM_021566829.2 mRNA upstream 254 60753006 ~ 60758431 (-) False abhd6b
XM_021566830.2 mRNA upstream 254 60753006 ~ 60758788 (-) False abhd6b
XM_021566832.2 mRNA upstream 24326 60777078 ~ 60790836 (-) False slmapb
XM_021566833.2 mRNA upstream 24326 60777078 ~ 60790836 (-) False slmapb
XM_021566831.2 mRNA upstream 24326 60777078 ~ 60790844 (-) True slmapb
TU1594806 other downstream 55722 60693609 ~ 60694036 (-) True G1396543
TU1594786 other downstream 86242 60661556 ~ 60663516 (-) False LOC118939463
TU1594716 other downstream 167723 60554756 ~ 60582035 (-) False G1396467
TU1594714 other downstream 167723 60557038 ~ 60582035 (-) True G1396467
TU1593009 other downstream 1392909 59354200 ~ 59356849 (-) True G1394978
TU1594840 other upstream 353 60753105 ~ 60754871 (-) True abhd6b
TU1597246 other upstream 1981991 62734743 ~ 62735569 (-) True G1398619
TU1597892 other upstream 2446367 63199119 ~ 63292201 (-) True G1399235
TU1598025 other upstream 2632097 63384849 ~ 63385262 (-) True G1399367
TU1599309 other upstream 3350618 64103370 ~ 64105039 (-) True G1400503

Expression Profile