RNA id: TU1594840



Basic Information


Item Value
RNA id TU1594840
length 734
RNA type TUCP
GC content 0.41
exon number 4
gene id abhd6b
representative True

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 60753006 ~ 60758788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTCTATCCGGCTCAGACAGACGGATACACTTTTACGTCTGCTTCATTAGATACACACAGACTACagagaggaatgtacacaacacaaagaggagagggatagagaaaATTCTTCAAGGACTGGTGGATGTTCGGCTTCCACACAATGATTTTTATCAAGAAGTTTTCATGGAGATATTGGGTGAGAACTCCAGATACGCCCTACAGGAAAATTTGCAGCTGATTACTGCCCCTTTGCAAGTCATTTGGGGCAAACAGGACCAGGTGGTGGATGTCTCTGGAGCTGTGGTAGTGGCGGAGGCCTTGCCCGGTTGCAGGGTGGACCTGTTAGAGAACTGTGGCCACTCTGTGGTGATGGAGAGGCCTCGCCGGACAGCCAAACTCATCATGGAGTTTATTATCTCCCTGGGTACCACCAGCGGAACCATTAAGAAGCGCTCCTGAGAAATACATTCTTTATGGAAATTGTATTATTTAGTCAAGTATTTTATTTTGGTTTAACGATCAACTATTTACTGTAAACTCTTAATTTTTCAGATTCAGGAATTTTTTTCACCCATGTAATATCTTGGTCAAATATGTTGTTTTCCTCTTCCTGCAATGTTTGATCACATTTGACTAAATTATTAAACCCTGCCTGTGTCTAATTGAATTGATTTTCATCAAACTATGCTGATGGAATGTTTGTAGCTAGCCTATGTGCATAAAATAAAGAATACTTCCATCTCTTTTCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1594814 lncRNA downstream 47539 60705126 ~ 60705566 (-) True G1396551
TU1594813 lncRNA downstream 48117 60704582 ~ 60704988 (-) True G1396550
TU1594812 lncRNA downstream 49495 60703081 ~ 60703610 (-) True G1396549
TU1594811 lncRNA downstream 50114 60702727 ~ 60702991 (-) True G1396548
TU1594810 lncRNA downstream 50936 60701618 ~ 60702169 (-) True G1396547
TU1596089 lncRNA upstream 37901 60792772 ~ 60793052 (-) True G1397641
TU1596113 lncRNA upstream 141043 60895914 ~ 60905557 (-) True G1397662
TU1596115 lncRNA upstream 154517 60909388 ~ 60911920 (-) True G1397663
TU1596111 lncRNA upstream 157103 60911974 ~ 60914109 (-) True G1397660
TU1596273 lncRNA upstream 329162 61084033 ~ 61085092 (-) True G1397784
XM_021566827.2 mRNA downstream 353 60749758 ~ 60752752 (-) True kctd6b
XM_021566826.2 mRNA downstream 422 60749758 ~ 60752683 (-) False kctd6b
XR_005036568.1 mRNA downstream 9343 60690268 ~ 60743762 (-) False LOC110492475
XR_005036569.1 mRNA downstream 9345 60690268 ~ 60743760 (-) False LOC110492475
XM_021566824.2 mRNA downstream 9357 60710026 ~ 60743748 (-) False LOC110492475
XM_021566832.2 mRNA upstream 22207 60777078 ~ 60790836 (-) False slmapb
XM_021566833.2 mRNA upstream 22207 60777078 ~ 60790836 (-) False slmapb
XM_021566831.2 mRNA upstream 22207 60777078 ~ 60790844 (-) True slmapb
XM_021566835.2 mRNA upstream 48614 60803485 ~ 60812247 (-) True si:ch73-233m11.2
XM_021566839.2 mRNA upstream 78202 60833073 ~ 60840028 (-) True LOC110492482
TU1594806 other downstream 59069 60693609 ~ 60694036 (-) True G1396543
TU1594786 other downstream 89589 60661556 ~ 60663516 (-) False LOC118939463
TU1594716 other downstream 171070 60554756 ~ 60582035 (-) False G1396467
TU1594714 other downstream 171070 60557038 ~ 60582035 (-) True G1396467
TU1593009 other downstream 1396256 59354200 ~ 59356849 (-) True G1394978
TU1597246 other upstream 1979872 62734743 ~ 62735569 (-) True G1398619
TU1597892 other upstream 2444248 63199119 ~ 63292201 (-) True G1399235
TU1598025 other upstream 2629978 63384849 ~ 63385262 (-) True G1399367
TU1599309 other upstream 3348499 64103370 ~ 64105039 (-) True G1400503
TU1599365 other upstream 3502055 64256926 ~ 64257433 (-) True G1400552

Expression Profile