RNA id: XM_021566871.2


Basic Information

Item Value
RNA id XM_021566871.2
length 2224
RNA type mRNA
GC content 0.50
exon number 11
gene id asb14b
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 61552330 ~ 61558422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCTTTGGAAGCTTAGTGTGATTGACCCACTGAAGATTGTAGGGCCATCGGAGAAACAGCCTGTTGACTGAAGCTCAAGTTAGTAGTTTCCTGGTGAGTTGACCCTTCCTGGAGTGACAGATGAACTCCGAGACAGAGGCAGGATATGTTTTTGACCAACCAGAAGAGGACGTGGTCACACAGTATATGATTGAACAGAGCCTTCTGAAATACAACAAGCACAAAGGCTCACTCCCTAATGATCCTGCAGGCCCTGAAGGTGATCCTGATGAGGTCTTTACAGTGATAAAGGAAGGTAATGAGGAGGCCCTAATAAGGCTAGCTGAGCAACCAGGAGCCATGTCCAGAGTAGACGACAGAGGATGGATCCCGTTACATGAGGCCGCAGTGCAGGAGAAGAAAAGTATACTGGAGATCGTCTTCTCAGCTTCCCCCCAGGGCGCAGAGCAGTGCCGGACTCTGAAAGGAGAGACACCTCTCTTCCTGGCTGTAGTGTGCGGCCTGAGGGAAAATGCTACGTTTCTGCTCCAGAACGGATGCTGTCCAGACCTCCAGAACGATGACGAGGAATCTCCACTTGTGGCAGCTATAGTAAATGACCAATATGATTGTGCCTCGCTCCTGCTTCGTTGCAATGCCAAGGTGGACCAAACAGGAGATCTGGAGCGGACTGCCCTCCATGAGGCATCCCTCCTGGGTCTGGACAATTTTGTTAACCTGCTACTGCATTCCGGAGCCGACCCAAACGCAAGGGATGTTGACAAGCTGACCCCACTGGCACTGGCTGCAGAGACAGGGCACCTTAACGTAGTGGAGGTCCTGCtacagaaaggaGCCAGCATGCAGTCTCAGACAGAGGGCTCTGTGCTGTTTGAGGCGGTTGCATCAGGTAATCCTGACATCATCTCTCTGCTGCTGGACTATGGGGCAGAGCCTGACATGCCCAACCACAGTGGGCACCTACCCATCCACCGTGCTGCATACCATGGGCATCTGTTggtgTTGGAACGGTTGATCTCAGCAACAAAGATGGAGGCAGTGAAGAAGAGTGGTATGAGTCCCCTCCACTCTGCTGCTGCTGGGGGACACACCCAGTGCCTGGAGGTCCTTCTCAATGCAGGCTACGACCCCAACTTCATGCTGCACCCACGCGTGCGCAATAAATACGATGACGAACGCAGGTCGGCTCTCTACTTTGCTGTATCGAACAACGATGTCCAGTCCACCCGTCTGCTGCTGGAGGCTGAGGCCATGGTCAACCAGGACCCTGTCAACTGTCTACAGGTGGCTCTGCGGCTGGGCAACTATGAGCTTATAAACACTCTTCTGAGGTACGGTGCTAACGCCAGCTACTATTCTCGTGTCAACACAACACACTTCCCATCAGCACTGCAGTATGCATTGAAAGATGAGGTCATGCTGAGGATGCTTCTCAACCATGGATACGATGTACAGCGCTGCTTTGACTGTCCCTATGGAGACAGTTCCCATGACTACGCACCCTGGACGACCTCGTTCACCAAAGACATGGTGttctGTGAGGTGATAACAGTCAAGTGGCTGAAACACATCTCGGCACAGGTAGTGCGCATCATGCTAGACTACACAGACCACGTCACGCTCTGTGTCAAACTCAAGGAATGCCTGAAGACACAGAAACAGTGGCCTGAGATATGCTATATCCAAGAGAATGTGCGCAGCCTGAAGCACCTGTGTCGGCTGCGTATCCGGGACTGCCTGAGCCGTCTGCATCTGCGATCCCCAGCCTTCATCAGCTTCATGCCTCTCCCCACCAGGCTTAAGGACTACCTCCGATACAGAGAGTATGACATCTACAGCAGGGGCAGCCCTGATTGATCATAACATAATGGCACTCTCTAAGAAAGTTCCAGTTCCTTATCAGTTTGTCTGGACCTTGTTTACTTTTGTAAGTGTGTGCCTCTTTAGTTCCTACTCGAGGAtcaacaaacaagcaatattctCTCCCTTTTTTCCTACTCTGAATGCATGTCATGTCATAGGCAGCACAATGTGTGTTGCTCCTAGGTTGAGCATTTTGGGTCACTGAACCAACTGGGATAAGCTTGTTTGgttaaaattatatttttgtatAATTATTGAATTTGTAAGGAATGACACACTTAGGGATTATGTGTAATGTCCTATTTGTATCTGTGATCTATAATAATTGTATTTTGTCATTAAACATTTGAACAGAAGTCTTA

Function

GO: NA

KEGG:

id description
K10336 ASB14; ankyrin repeat and SOCS box protein 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1596492 lncRNA downstream 44467 61492168 ~ 61507863 (-) True G1397992
TU1596447 lncRNA downstream 131730 61420186 ~ 61420600 (-) True G1397951
TU1596310 lncRNA downstream 392669 61158624 ~ 61159661 (-) True G1397819
TU1596319 lncRNA downstream 395538 61156535 ~ 61156792 (-) True G1397828
TU1596317 lncRNA downstream 397958 61154172 ~ 61154372 (-) True G1397826
TU1596534 lncRNA upstream 45524 61603946 ~ 61604162 (-) True G1398030
TU1596537 lncRNA upstream 47587 61606009 ~ 61606353 (-) True G1398033
TU1596539 lncRNA upstream 53749 61612171 ~ 61612404 (-) True G1398035
TU1596540 lncRNA upstream 55816 61614238 ~ 61614440 (-) True G1398036
TU1596545 lncRNA upstream 61411 61619833 ~ 61620260 (-) True G1398041
XM_036947501.1 mRNA downstream 576 61525712 ~ 61551754 (-) False LOC110492491
XM_036947502.1 mRNA downstream 576 61525712 ~ 61551754 (-) False LOC110492491
XM_036947503.1 mRNA downstream 576 61525712 ~ 61551754 (-) True LOC110492491
XM_036947499.1 mRNA downstream 577 61525712 ~ 61551753 (-) False LOC110492491
XM_036947505.1 mRNA upstream 278 61558700 ~ 61594821 (-) True dnah12
XM_021566896.2 mRNA upstream 36671 61595093 ~ 61596712 (-) False LOC110492509
XM_021566895.2 mRNA upstream 36671 61595093 ~ 61601423 (-) True LOC110492509
XM_021566892.2 mRNA upstream 128825 61687247 ~ 61689079 (-) True LOC110492507
XM_021566869.2 mRNA upstream 220696 61779118 ~ 61796706 (-) False LOC110492496
TU1594840 other downstream 797459 60753105 ~ 60754871 (-) True abhd6b
TU1594806 other downstream 858294 60693609 ~ 60694036 (-) True G1396543
TU1594786 other downstream 888814 60661556 ~ 60663516 (-) False LOC118939463
TU1594716 other downstream 970295 60554756 ~ 60582035 (-) False G1396467
TU1597246 other upstream 1176321 62734743 ~ 62735569 (-) True G1398619
TU1597892 other upstream 1640697 63199119 ~ 63292201 (-) True G1399235
TU1598025 other upstream 1826427 63384849 ~ 63385262 (-) True G1399367
TU1599309 other upstream 2544948 64103370 ~ 64105039 (-) True G1400503
TU1599365 other upstream 2698504 64256926 ~ 64257433 (-) True G1400552

Expression Profile