Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC118939464 |
| length | 878 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 6 |
| gene id | LOC118939464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68160807 ~ 68163967 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0003746 | translation elongation factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1603399 | lncRNA | downstream | 6340 | 68154260 ~ 68154467 (-) | True | G1404017 |
| TU1603398 | lncRNA | downstream | 7495 | 68153096 ~ 68153312 (-) | True | G1404016 |
| TU1603376 | lncRNA | downstream | 9180 | 68151314 ~ 68151627 (-) | True | G1403999 |
| TU1603371 | lncRNA | downstream | 13296 | 68147301 ~ 68147511 (-) | True | G1403994 |
| TU1603334 | lncRNA | downstream | 14027 | 68078655 ~ 68146780 (-) | True | G1403966 |
| TU1603413 | lncRNA | upstream | 21392 | 68185359 ~ 68185640 (-) | True | G1404031 |
| TU1603418 | lncRNA | upstream | 26058 | 68190025 ~ 68190262 (-) | True | G1404035 |
| TU1603443 | lncRNA | upstream | 49324 | 68213291 ~ 68214106 (-) | False | G1404059 |
| TU1603445 | lncRNA | upstream | 49324 | 68213291 ~ 68214106 (-) | False | G1404059 |
| TU1603446 | lncRNA | upstream | 49324 | 68213291 ~ 68214106 (-) | True | G1404059 |
| XM_036947629.1 | mRNA | downstream | 120266 | 67777276 ~ 68040541 (-) | False | LOC110491155 |
| XM_036947630.1 | mRNA | downstream | 120266 | 67777299 ~ 68040541 (-) | False | LOC110491155 |
| XM_036947627.1 | mRNA | downstream | 120267 | 67773270 ~ 68040540 (-) | False | LOC110491155 |
| XM_036947631.1 | mRNA | downstream | 120267 | 67777276 ~ 68040540 (-) | False | LOC110491155 |
| XM_036947628.1 | mRNA | downstream | 284918 | 67773270 ~ 67875889 (-) | False | LOC110491155 |
| XM_036947645.1 | mRNA | upstream | 6059 | 68170026 ~ 68176211 (-) | False | LOC110492614 |
| XM_036947646.1 | mRNA | upstream | 6059 | 68170026 ~ 68176211 (-) | True | LOC110492614 |
| NM_001124722.1 | mRNA | upstream | 19258 | 68183225 ~ 68184419 (-) | True | id1 |
| XM_036947641.1 | mRNA | upstream | 85078 | 68249045 ~ 68265345 (-) | False | LOC110492616 |
| XM_036947643.1 | mRNA | upstream | 85078 | 68249045 ~ 68265361 (-) | True | LOC110492616 |
| TU1602806 | other | downstream | 716628 | 67443421 ~ 67444179 (-) | True | G1403498 |
| TU1601943 | other | downstream | 1666140 | 66484901 ~ 66494667 (-) | False | G1402707 |
| TU1601912 | other | downstream | 1734485 | 66425551 ~ 66426322 (-) | False | G1402686 |
| TU1601915 | other | downstream | 1734485 | 66425551 ~ 66426322 (-) | True | G1402686 |
| TU1600365 | other | downstream | 2406197 | 65720507 ~ 65754610 (-) | True | LOC110492562 |
| TU1604092 | other | upstream | 627222 | 68791189 ~ 68795025 (-) | True | LOC118939478 |
| TU1604570 | other | upstream | 1039319 | 69203286 ~ 69207158 (-) | True | G1404974 |
| TU1604630 | other | upstream | 1113860 | 69277827 ~ 69280359 (-) | True | G1405016 |
| TU1604821 | other | upstream | 1353788 | 69517755 ~ 69518113 (-) | True | G1405172 |
| TU1605761 | other | upstream | 1914690 | 70078657 ~ 70095541 (-) | True | G1405917 |
