RNA id: trnah-gug-44


Basic Information

Item Value
RNA id trnah-gug-44
length 72
RNA type mRNA
GC content 0.57
exon number 1
gene id trnah-gug-44
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71029094 ~ 71029165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gccgtgatcgtatagtggttagtactctgcgttgtggtcgcagcaaccccggttcaaatccgggtcacggca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1606353 lncRNA downstream 39564 70962973 ~ 70989530 (-) True G1406388
TU1606327 lncRNA downstream 122878 70905290 ~ 70906216 (-) True G1406367
TU1606325 lncRNA downstream 125021 70903817 ~ 70904073 (-) True G1406365
TU1606324 lncRNA downstream 127189 70901634 ~ 70901905 (-) True G1406364
TU1606321 lncRNA downstream 128090 70900631 ~ 70901004 (-) True G1406361
TU1606377 lncRNA upstream 43942 71073107 ~ 71076732 (-) True G1406407
TU1606391 lncRNA upstream 65814 71094979 ~ 71095352 (-) True G1406416
TU1606394 lncRNA upstream 68834 71097999 ~ 71098250 (-) True G1406419
TU1606396 lncRNA upstream 70080 71099245 ~ 71099572 (-) True G1406421
TU1606478 lncRNA upstream 128165 71157330 ~ 71157705 (-) True G1406482
trnat-agu-59 mRNA downstream 947 71028074 ~ 71028147 (-) True trnat-agu-59
trnah-gug-43 mRNA downstream 1305 71027718 ~ 71027789 (-) True trnah-gug-43
trnat-agu-58 mRNA downstream 2323 71026698 ~ 71026771 (-) True trnat-agu-58
trnat-agu-57 mRNA downstream 3684 71025337 ~ 71025410 (-) True trnat-agu-57
trnah-gug-42 mRNA downstream 4042 71024981 ~ 71025052 (-) True trnah-gug-42
trnat-agu-60 mRNA upstream 285 71029450 ~ 71029523 (-) True trnat-agu-60
trnat-agu-61 mRNA upstream 1646 71030811 ~ 71030884 (-) True trnat-agu-61
trnat-agu-62 mRNA upstream 3007 71032172 ~ 71032245 (-) True trnat-agu-62
trnah-gug-45 mRNA upstream 4027 71033192 ~ 71033263 (-) True trnah-gug-45
trnah-gug-46 mRNA upstream 5403 71034568 ~ 71034639 (-) True trnah-gug-46
TU1606185 other downstream 286915 70735647 ~ 70742179 (-) True G1406228
TU1605893 other downstream 807838 70219877 ~ 70221256 (-) True LOC110492660
TU1605761 other downstream 933553 70078657 ~ 70095541 (-) True G1405917
TU1604821 other downstream 1510981 69517755 ~ 69518113 (-) True G1405172
TU1604630 other downstream 1748735 69277827 ~ 69280359 (-) True G1405016
TU1606514 other upstream 231157 71260322 ~ 71260817 (-) True G1406514
TU1606849 other upstream 473314 71502479 ~ 71527677 (-) False G1406752
TU1606887 other upstream 499914 71529079 ~ 71545845 (-) False G1406752
TU1606851 other upstream 505400 71534565 ~ 71544501 (-) False G1406752
TU1606876 other upstream 507147 71536312 ~ 71545845 (-) False G1406752