RNA id: trnat-agu-65


Basic Information

Item Value
RNA id trnat-agu-65
length 74
RNA type mRNA
GC content 0.46
exon number 1
gene id trnat-agu-65
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71037676 ~ 71037749 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtgctgtggcttagttggttaaagtgcctgtctagtaaacaggagatcctgagttcaaatctcagcagtacct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1606353 lncRNA downstream 48146 70962973 ~ 70989530 (-) True G1406388
TU1606327 lncRNA downstream 131460 70905290 ~ 70906216 (-) True G1406367
TU1606325 lncRNA downstream 133603 70903817 ~ 70904073 (-) True G1406365
TU1606324 lncRNA downstream 135771 70901634 ~ 70901905 (-) True G1406364
TU1606321 lncRNA downstream 136672 70900631 ~ 70901004 (-) True G1406361
TU1606377 lncRNA upstream 35358 71073107 ~ 71076732 (-) True G1406407
TU1606391 lncRNA upstream 57230 71094979 ~ 71095352 (-) True G1406416
TU1606394 lncRNA upstream 60250 71097999 ~ 71098250 (-) True G1406419
TU1606396 lncRNA upstream 61496 71099245 ~ 71099572 (-) True G1406421
TU1606478 lncRNA upstream 119581 71157330 ~ 71157705 (-) True G1406482
trnah-gug-48 mRNA downstream 285 71037320 ~ 71037391 (-) True trnah-gug-48
trnat-agu-64 mRNA downstream 1303 71036300 ~ 71036373 (-) True trnat-agu-64
trnah-gug-47 mRNA downstream 1661 71035944 ~ 71036015 (-) True trnah-gug-47
trnat-agu-63 mRNA downstream 2679 71034924 ~ 71034997 (-) True trnat-agu-63
trnah-gug-46 mRNA downstream 3037 71034568 ~ 71034639 (-) True trnah-gug-46
trnat-agu-66 mRNA upstream 1288 71039037 ~ 71039110 (-) True trnat-agu-66
trnat-agu-67 mRNA upstream 2649 71040398 ~ 71040471 (-) True trnat-agu-67
trnat-agu-68 mRNA upstream 4010 71041759 ~ 71041832 (-) True trnat-agu-68
trnat-agu-69 mRNA upstream 5386 71043135 ~ 71043208 (-) True trnat-agu-69
trnat-agu-70 mRNA upstream 6762 71044511 ~ 71044584 (-) True trnat-agu-70
TU1606185 other downstream 295497 70735647 ~ 70742179 (-) True G1406228
TU1605893 other downstream 816420 70219877 ~ 70221256 (-) True LOC110492660
TU1605761 other downstream 942135 70078657 ~ 70095541 (-) True G1405917
TU1604821 other downstream 1519563 69517755 ~ 69518113 (-) True G1405172
TU1604630 other downstream 1757317 69277827 ~ 69280359 (-) True G1405016
TU1606514 other upstream 222573 71260322 ~ 71260817 (-) True G1406514
TU1606849 other upstream 464730 71502479 ~ 71527677 (-) False G1406752
TU1606887 other upstream 491330 71529079 ~ 71545845 (-) False G1406752
TU1606851 other upstream 496816 71534565 ~ 71544501 (-) False G1406752
TU1606876 other upstream 498563 71536312 ~ 71545845 (-) False G1406752