RNA id: trnat-agu-76


Basic Information

Item Value
RNA id trnat-agu-76
length 74
RNA type mRNA
GC content 0.51
exon number 1
gene id trnat-agu-76
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71561494 ~ 71561567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1606908 lncRNA upstream 778 71560249 ~ 71560716 (+) True trnat-agu-75
TU1606833 lncRNA upstream 20115 71537927 ~ 71541379 (+) True G1406739
TU1606803 lncRNA upstream 57900 71502570 ~ 71503594 (+) True G1406710
TU1606779 lncRNA upstream 63362 71497144 ~ 71498132 (+) False G1406690
TU1606776 lncRNA upstream 63362 71497654 ~ 71498132 (+) True G1406690
TU1606914 lncRNA downstream 42304 71603871 ~ 71606427 (+) True G1406773
TU1606931 lncRNA downstream 57980 71619547 ~ 71619958 (+) True G1406785
TU1606932 lncRNA downstream 63032 71624599 ~ 71624824 (+) True G1406786
TU1606933 lncRNA downstream 63304 71624871 ~ 71625136 (+) True G1406787
TU1606938 lncRNA downstream 75074 71636641 ~ 71636860 (+) True G1406792
trnat-agu-75 mRNA upstream 1017 71560404 ~ 71560477 (+) False trnat-agu-75
trnat-agu-74 mRNA upstream 5382 71556039 ~ 71556112 (+) True trnat-agu-74
trnat-agu-73 mRNA upstream 6472 71554949 ~ 71555022 (+) True trnat-agu-73
trnat-agu-72 mRNA upstream 10825 71550596 ~ 71550669 (+) True trnat-agu-72
trnat-agu-71 mRNA upstream 11915 71549506 ~ 71549579 (+) True trnat-agu-71
trnat-agu-77 mRNA downstream 2107 71563674 ~ 71563747 (+) True trnat-agu-77
trnat-agu-78 mRNA downstream 3197 71564764 ~ 71564837 (+) True trnat-agu-78
trnat-agu-79 mRNA downstream 4287 71565854 ~ 71565927 (+) True trnat-agu-79
trnat-agu-80 mRNA downstream 5377 71566944 ~ 71567017 (+) True trnat-agu-80
trnat-agu-81 mRNA downstream 8647 71570214 ~ 71570287 (+) True trnat-agu-81
TU1606602 other upstream 145067 71415899 ~ 71416427 (+) False G1406555
TU1606601 other upstream 145697 71413557 ~ 71415797 (+) False G1406555
TU1606510 other upstream 304517 71255979 ~ 71256977 (+) True G1406510
TU1606509 other upstream 309850 71251074 ~ 71251644 (+) True G1406509
TU1606508 other upstream 315471 71245573 ~ 71246023 (+) True G1406508
TU1607441 other downstream 541819 72103386 ~ 72103841 (+) True G1407190
TU1607455 other downstream 654746 72216313 ~ 72279555 (+) True G1407199
TU1607753 other downstream 1080416 72641983 ~ 72644864 (+) True ngrn
TU1607815 other downstream 1204335 72765902 ~ 72769218 (+) True G1407509
TU1607846 other downstream 1247163 72808730 ~ 72816723 (+) True LOC110492598