Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1523941 |
| length | 539 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G1333263 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 3369458 ~ 3371640 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1523915 | lncRNA | upstream | 46533 | 3322630 ~ 3322925 (+) | True | G1333242 |
| TU1523395 | lncRNA | upstream | 65148 | 3303968 ~ 3304310 (+) | True | G1332865 |
| TU1523379 | lncRNA | upstream | 102819 | 3265339 ~ 3266639 (+) | True | G1332851 |
| TU1523338 | lncRNA | upstream | 153180 | 3213114 ~ 3216278 (+) | True | G1332817 |
| TU1523332 | lncRNA | upstream | 162424 | 3206487 ~ 3207034 (+) | True | G1332812 |
| TU1523959 | lncRNA | downstream | 5809 | 3376206 ~ 3376413 (+) | True | G1333272 |
| TU1523963 | lncRNA | downstream | 8342 | 3378739 ~ 3378972 (+) | True | G1333276 |
| TU1523973 | lncRNA | downstream | 18191 | 3388588 ~ 3398294 (+) | False | G1333282 |
| TU1523977 | lncRNA | downstream | 21641 | 3392038 ~ 3394745 (+) | True | G1333282 |
| TU1524006 | lncRNA | downstream | 52513 | 3422910 ~ 3423382 (+) | True | G1333304 |
| XM_036945973.1 | mRNA | upstream | 167732 | 3065065 ~ 3201726 (+) | False | LOC110492796 |
| XR_005036399.1 | mRNA | downstream | 316146 | 3686543 ~ 3687093 (+) | True | LOC118939483 |
| XM_036945979.1 | mRNA | downstream | 324201 | 3694598 ~ 3730931 (+) | True | LOC118939498 |
| XM_036945980.1 | mRNA | downstream | 496087 | 3866484 ~ 3902198 (+) | True | btbd3b |
| XM_036945981.1 | mRNA | downstream | 764020 | 4134417 ~ 4229378 (+) | True | sptlc3 |
| XM_036945982.1 | mRNA | downstream | 874601 | 4244998 ~ 4337416 (+) | False | tasp1 |
| TU1523349 | other | upstream | 138051 | 3230199 ~ 3231407 (+) | False | G1332826 |
| TU1523350 | other | upstream | 138444 | 3230199 ~ 3231014 (+) | True | G1332826 |
| TU1523257 | other | upstream | 172207 | 3065318 ~ 3197251 (+) | False | LOC110492796 |
| TU1523191 | other | upstream | 395658 | 2972808 ~ 2973800 (+) | True | G1332701 |
| TU1523176 | other | upstream | 429518 | 2931220 ~ 2939940 (+) | True | LOC110491239 |
| TU1524854 | other | downstream | 969441 | 4339838 ~ 4340868 (+) | True | G1333963 |
| TU1525057 | other | downstream | 1364392 | 4734789 ~ 4937679 (+) | True | LOC110491218 |
| TU1525602 | other | downstream | 2149543 | 5519940 ~ 5521230 (+) | True | G1334530 |
| TU1525676 | other | downstream | 2333438 | 5703835 ~ 5704946 (+) | True | G1334592 |
| TU1527127 | other | downstream | 3220579 | 6590976 ~ 6591915 (+) | True | G1335704 |
