Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1538384 |
| length | 313 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1345609 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 15764010 ~ 15764322 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1538369 | lncRNA | downstream | 16369 | 15747441 ~ 15747641 (-) | True | G1345594 |
| TU1538358 | lncRNA | downstream | 32283 | 15731403 ~ 15731727 (-) | True | G1345583 |
| TU1538322 | lncRNA | downstream | 96933 | 15666785 ~ 15667077 (-) | True | G1345547 |
| TU1538318 | lncRNA | downstream | 102460 | 15657746 ~ 15661550 (-) | True | G1345543 |
| TU1538319 | lncRNA | downstream | 102880 | 15659734 ~ 15661130 (-) | True | G1345544 |
| TU1538394 | lncRNA | upstream | 6169 | 15770491 ~ 15770829 (-) | True | G1345619 |
| TU1538536 | lncRNA | upstream | 123598 | 15887920 ~ 15888136 (-) | True | G1345756 |
| TU1538538 | lncRNA | upstream | 124061 | 15888383 ~ 15888622 (-) | True | G1345758 |
| TU1538541 | lncRNA | upstream | 125116 | 15889438 ~ 15889693 (-) | True | G1345761 |
| TU1538544 | lncRNA | upstream | 127232 | 15891554 ~ 15891983 (-) | True | G1345764 |
| XM_021564905.2 | mRNA | downstream | 164656 | 15596514 ~ 15599354 (-) | True | LOC110491444 |
| XM_021564903.2 | mRNA | downstream | 213105 | 15536008 ~ 15550905 (-) | True | LOC110491442 |
| XM_021564900.2 | mRNA | downstream | 238599 | 15523251 ~ 15525411 (-) | True | LOC110491441 |
| XM_021564895.2 | mRNA | downstream | 244723 | 15487163 ~ 15519287 (-) | False | LOC110491439 |
| XM_036946293.1 | mRNA | upstream | 279922 | 16044244 ~ 16180403 (-) | False | LOC110491446 |
| XM_021564906.2 | mRNA | upstream | 279922 | 16044244 ~ 16180566 (-) | False | LOC110491446 |
| XM_021564907.2 | mRNA | upstream | 279922 | 16044244 ~ 16180566 (-) | True | LOC110491446 |
| XM_036946301.1 | mRNA | upstream | 463436 | 16227758 ~ 16246594 (-) | False | usp22 |
| XM_036946298.1 | mRNA | upstream | 463436 | 16227758 ~ 16264740 (-) | False | usp22 |
| TU1538336 | other | downstream | 64747 | 15698985 ~ 15699263 (-) | True | G1345561 |
| TU1537992 | other | downstream | 510440 | 15251377 ~ 15253570 (-) | True | G1345259 |
| TU1536004 | other | downstream | 2129832 | 13618009 ~ 13634178 (-) | True | G1343452 |
| TU1536006 | other | downstream | 2143270 | 13585136 ~ 13620740 (-) | False | G1343452 |
| TU1535820 | other | downstream | 2512342 | 13251434 ~ 13251668 (-) | True | G1343278 |
| TU1539993 | other | upstream | 1160200 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539994 | other | upstream | 1160200 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539999 | other | upstream | 1160200 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1540000 | other | upstream | 1160200 | 16924522 ~ 16929432 (-) | True | G1347067 |
| TU1540318 | other | upstream | 1431008 | 17195330 ~ 17196129 (-) | True | G1347343 |
