Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1540196 |
| length | 1095 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G1347244 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17065750 ~ 17066887 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1540134 | lncRNA | downstream | 19250 | 16989972 ~ 17046500 (-) | True | G1347183 |
| TU1540099 | lncRNA | downstream | 116404 | 16949026 ~ 16949346 (-) | True | G1347148 |
| TU1539989 | lncRNA | downstream | 139337 | 16924522 ~ 16926413 (-) | False | G1347067 |
| TU1540226 | lncRNA | upstream | 32611 | 17099498 ~ 17100720 (-) | True | G1347269 |
| TU1540321 | lncRNA | upstream | 91464 | 17158351 ~ 17160097 (-) | False | LOC110491465 |
| TU1540323 | lncRNA | upstream | 93302 | 17160189 ~ 17160397 (-) | True | G1347348 |
| TU1540316 | lncRNA | upstream | 95891 | 17162778 ~ 17212112 (-) | True | LOC110491465 |
| TU1540334 | lncRNA | upstream | 120003 | 17186890 ~ 17194727 (-) | True | G1347357 |
| XM_021564924.2 | mRNA | downstream | 332646 | 16728503 ~ 16733104 (-) | True | LOC110491457 |
| XM_021564925.2 | mRNA | downstream | 332745 | 16728503 ~ 16733005 (-) | False | LOC110491457 |
| XM_021564926.2 | mRNA | downstream | 340771 | 16695214 ~ 16724979 (-) | False | LOC110491459 |
| XM_036946309.1 | mRNA | downstream | 340771 | 16695214 ~ 16724979 (-) | True | LOC110491459 |
| XM_021564922.2 | mRNA | downstream | 384186 | 16653966 ~ 16681564 (-) | True | lmf1 |
| XM_036946348.1 | mRNA | upstream | 91427 | 17158314 ~ 17173932 (-) | False | LOC110491465 |
| XM_036946345.1 | mRNA | upstream | 91427 | 17158314 ~ 17173934 (-) | False | LOC110491465 |
| XM_036946346.1 | mRNA | upstream | 91427 | 17158314 ~ 17173934 (-) | False | LOC110491465 |
| XM_036946347.1 | mRNA | upstream | 91427 | 17158314 ~ 17173934 (-) | False | LOC110491465 |
| XM_036946352.1 | mRNA | upstream | 239171 | 17306058 ~ 17352385 (-) | False | LOC110491470 |
| TU1539993 | other | downstream | 136318 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539994 | other | downstream | 136318 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539999 | other | downstream | 136318 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1540000 | other | downstream | 136318 | 16924522 ~ 16929432 (-) | True | G1347067 |
| TU1538336 | other | downstream | 1366487 | 15698985 ~ 15699263 (-) | True | G1345561 |
| TU1540318 | other | upstream | 128443 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1540612 | other | upstream | 322498 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1541907 | other | upstream | 1350728 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1542585 | other | upstream | 1567144 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 2253983 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
