Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1540825 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1347807 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17575554 ~ 17575791 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1540810 | lncRNA | downstream | 5609 | 17552057 ~ 17569945 (-) | True | LOC110491488 |
| TU1540622 | lncRNA | downstream | 167681 | 17405545 ~ 17407873 (-) | True | G1347609 |
| TU1540609 | lncRNA | downstream | 184393 | 17389385 ~ 17391161 (-) | False | LOC110491477 |
| TU1540613 | lncRNA | downstream | 184898 | 17389099 ~ 17390656 (-) | False | LOC110491477 |
| TU1540561 | lncRNA | downstream | 281919 | 17287995 ~ 17293635 (-) | True | G1347556 |
| TU1540870 | lncRNA | upstream | 20375 | 17596166 ~ 17607260 (-) | True | G1347851 |
| TU1540899 | lncRNA | upstream | 54841 | 17630632 ~ 17630937 (-) | True | G1347877 |
| TU1541069 | lncRNA | upstream | 63820 | 17639611 ~ 17659833 (-) | True | G1348028 |
| TU1541099 | lncRNA | upstream | 99216 | 17675007 ~ 17675304 (-) | True | G1348051 |
| TU1541106 | lncRNA | upstream | 121137 | 17696928 ~ 17697264 (-) | True | G1348058 |
| XR_002468843.2 | mRNA | downstream | 5672 | 17548205 ~ 17569882 (-) | False | LOC110491488 |
| XR_005036456.1 | mRNA | downstream | 181289 | 17389375 ~ 17394265 (-) | False | LOC110491477 |
| XM_036946364.1 | mRNA | downstream | 181859 | 17389375 ~ 17393695 (-) | False | LOC110491477 |
| XM_021564950.2 | mRNA | downstream | 194844 | 17376457 ~ 17380710 (-) | True | LOC110491474 |
| XM_021564948.2 | mRNA | downstream | 215924 | 17356395 ~ 17359630 (-) | True | LOC110491471 |
| LOC110492844 | mRNA | upstream | 95695 | 17671486 ~ 17682483 (-) | True | LOC110492844 |
| XM_021564962.2 | mRNA | upstream | 108680 | 17684471 ~ 17694082 (-) | True | LOC110491480 |
| XM_036946367.1 | mRNA | upstream | 138089 | 17713880 ~ 17743000 (-) | False | LOC110491482 |
| XM_021564964.2 | mRNA | upstream | 138089 | 17713880 ~ 17868844 (-) | False | LOC110491482 |
| XM_021564965.2 | mRNA | upstream | 138089 | 17713880 ~ 17868844 (-) | True | LOC110491482 |
| TU1540612 | other | downstream | 183600 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 379425 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539994 | other | downstream | 646122 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1541907 | other | upstream | 841824 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1542585 | other | upstream | 1058240 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 1745079 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 1885250 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 2115901 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
