Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1541914 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1348784 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18334328 ~ 18334543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1541807 | lncRNA | downstream | 135220 | 18198801 ~ 18199108 (-) | True | G1348689 |
| TU1541787 | lncRNA | downstream | 169966 | 18163359 ~ 18164362 (-) | True | G1348669 |
| TU1541743 | lncRNA | downstream | 237152 | 18096883 ~ 18097176 (-) | True | G1348631 |
| TU1541734 | lncRNA | downstream | 238511 | 18092488 ~ 18095817 (-) | False | G1348630 |
| TU1541931 | lncRNA | upstream | 44990 | 18379533 ~ 18380412 (-) | True | G1348800 |
| TU1541935 | lncRNA | upstream | 55703 | 18390246 ~ 18390523 (-) | True | G1348804 |
| TU1541908 | lncRNA | upstream | 56228 | 18390771 ~ 18392168 (-) | True | G1348778 |
| TU1541994 | lncRNA | upstream | 179935 | 18514478 ~ 18514714 (-) | True | G1348858 |
| TU1542009 | lncRNA | upstream | 189636 | 18524179 ~ 18524379 (-) | True | hoxb1b |
| XM_036946372.1 | mRNA | downstream | 92218 | 18231526 ~ 18242110 (-) | True | pdk2a |
| XM_021564981.2 | mRNA | downstream | 92220 | 18231526 ~ 18242108 (-) | False | pdk2a |
| XM_021564980.2 | mRNA | downstream | 107409 | 18223484 ~ 18226919 (-) | True | LOC110491495 |
| XR_005036457.1 | mRNA | downstream | 111413 | 18102250 ~ 18222915 (-) | True | myo1d |
| XM_036946371.1 | mRNA | downstream | 111418 | 18098959 ~ 18222910 (-) | False | myo1d |
| NM_001124580.1 | mRNA | upstream | 61934 | 18396477 ~ 18405643 (-) | False | LOC100136345 |
| XM_021564384.2 | mRNA | upstream | 61934 | 18396477 ~ 18409233 (-) | False | LOC100136345 |
| XM_021564383.2 | mRNA | upstream | 61934 | 18396477 ~ 18409234 (-) | False | LOC100136345 |
| XM_021564385.2 | mRNA | upstream | 61934 | 18396477 ~ 18409234 (-) | False | LOC100136345 |
| XM_021564386.2 | mRNA | upstream | 61934 | 18396477 ~ 18409234 (-) | True | LOC100136345 |
| TU1540612 | other | downstream | 942374 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 1138199 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539994 | other | downstream | 1404896 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1541907 | other | upstream | 83072 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1542585 | other | upstream | 299488 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 986327 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 1126498 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 1357149 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
