Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1541994 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G1348858 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18514478 ~ 18514714 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1541908 | lncRNA | downstream | 122310 | 18390771 ~ 18392168 (-) | True | G1348778 |
| TU1541935 | lncRNA | downstream | 123955 | 18390246 ~ 18390523 (-) | True | G1348804 |
| TU1541931 | lncRNA | downstream | 134066 | 18379533 ~ 18380412 (-) | True | G1348800 |
| TU1541914 | lncRNA | downstream | 179935 | 18334328 ~ 18334543 (-) | True | G1348784 |
| TU1541807 | lncRNA | downstream | 315370 | 18198801 ~ 18199108 (-) | True | G1348689 |
| TU1542009 | lncRNA | upstream | 9465 | 18524179 ~ 18524379 (-) | True | hoxb1b |
| TU1542506 | lncRNA | upstream | 13461 | 18528175 ~ 18528409 (-) | False | LOC110491505 |
| TU1542508 | lncRNA | upstream | 14817 | 18529531 ~ 18529762 (-) | True | LOC110491505 |
| TU1542517 | lncRNA | upstream | 18840 | 18533554 ~ 18533859 (-) | True | G1349314 |
| TU1542520 | lncRNA | upstream | 23362 | 18538076 ~ 18538335 (-) | True | G1349317 |
| XM_021564996.2 | mRNA | downstream | 2065 | 18477077 ~ 18512413 (-) | False | LOC110491502 |
| XM_021564995.2 | mRNA | downstream | 2066 | 18477670 ~ 18512412 (-) | True | LOC110491502 |
| XM_036946374.1 | mRNA | downstream | 56957 | 18447916 ~ 18457521 (-) | True | cbx1b |
| XM_021565000.2 | mRNA | downstream | 56958 | 18447916 ~ 18457520 (-) | False | cbx1b |
| XM_021565002.2 | mRNA | downstream | 56959 | 18447916 ~ 18457519 (-) | False | cbx1b |
| XM_021565005.2 | mRNA | upstream | 7739 | 18522453 ~ 18525045 (-) | False | hoxb1b |
| XM_021565004.2 | mRNA | upstream | 10492 | 18525206 ~ 18530752 (-) | False | LOC110491505 |
| XM_036946377.1 | mRNA | upstream | 10492 | 18525206 ~ 18532213 (-) | False | LOC110491505 |
| XM_036946378.1 | mRNA | upstream | 10492 | 18525206 ~ 18550690 (-) | False | LOC110491505 |
| XM_036946376.1 | mRNA | upstream | 10493 | 18525207 ~ 18530512 (-) | False | LOC110491505 |
| TU1541907 | other | downstream | 91292 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1540612 | other | downstream | 1122524 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 1318349 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539994 | other | downstream | 1585046 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1542585 | other | upstream | 119317 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 806156 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 946327 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 1176978 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
| TU1545321 | other | upstream | 1815686 | 20330400 ~ 20333729 (-) | True | LOC110491567 |
