Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1542517 |
| length | 306 |
| lncRNA type | intronic |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1349314 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18533554 ~ 18533859 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1542508 | lncRNA | downstream | 3792 | 18529531 ~ 18529762 (-) | True | LOC110491505 |
| TU1542506 | lncRNA | downstream | 5145 | 18528175 ~ 18528409 (-) | False | LOC110491505 |
| TU1542009 | lncRNA | downstream | 9175 | 18524179 ~ 18524379 (-) | True | hoxb1b |
| TU1541994 | lncRNA | downstream | 18840 | 18514478 ~ 18514714 (-) | True | G1348858 |
| TU1541908 | lncRNA | downstream | 141386 | 18390771 ~ 18392168 (-) | True | G1348778 |
| TU1542520 | lncRNA | upstream | 4217 | 18538076 ~ 18538335 (-) | True | G1349317 |
| TU1542544 | lncRNA | upstream | 20089 | 18553948 ~ 18554545 (-) | False | ttll6 |
| TU1542547 | lncRNA | upstream | 22863 | 18556722 ~ 18557003 (-) | True | G1349329 |
| TU1542546 | lncRNA | upstream | 24891 | 18558750 ~ 18559714 (-) | True | ttll6 |
| TU1542558 | lncRNA | upstream | 44695 | 18578554 ~ 18578786 (-) | True | G1349340 |
| XM_036946377.1 | mRNA | downstream | 1341 | 18525206 ~ 18532213 (-) | False | LOC110491505 |
| XM_036946375.1 | mRNA | downstream | 1342 | 18525208 ~ 18532212 (-) | False | LOC110491505 |
| XM_021565004.2 | mRNA | downstream | 2802 | 18525206 ~ 18530752 (-) | False | LOC110491505 |
| XM_036946376.1 | mRNA | downstream | 3042 | 18525207 ~ 18530512 (-) | False | LOC110491505 |
| XM_021565005.2 | mRNA | downstream | 8509 | 18522453 ~ 18525045 (-) | False | hoxb1b |
| XM_021565006.2 | mRNA | upstream | 7389 | 18541248 ~ 18543472 (-) | True | LOC110491507 |
| XM_021565007.2 | mRNA | upstream | 10105 | 18543964 ~ 18546172 (-) | True | LOC110491508 |
| XM_036945852.1 | mRNA | upstream | 17336 | 18551195 ~ 18552971 (-) | True | LOC110492883 |
| XM_021565008.2 | mRNA | upstream | 19317 | 18553176 ~ 18575510 (-) | False | ttll6 |
| XM_021565011.2 | mRNA | upstream | 19317 | 18553176 ~ 18575510 (-) | False | ttll6 |
| TU1541907 | other | downstream | 110368 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1540612 | other | downstream | 1141600 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 1337425 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539999 | other | downstream | 1604122 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1542585 | other | upstream | 100172 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 787011 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 927182 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 1157833 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
| TU1545321 | other | upstream | 1796541 | 20330400 ~ 20333729 (-) | True | LOC110491567 |
