Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1542558 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1349340 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18578554 ~ 18578786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1542546 | lncRNA | downstream | 18840 | 18558750 ~ 18559714 (-) | True | ttll6 |
| TU1542547 | lncRNA | downstream | 21551 | 18556722 ~ 18557003 (-) | True | G1349329 |
| TU1542544 | lncRNA | downstream | 24009 | 18553948 ~ 18554545 (-) | False | ttll6 |
| TU1542520 | lncRNA | downstream | 40219 | 18538076 ~ 18538335 (-) | True | G1349317 |
| TU1542517 | lncRNA | downstream | 44695 | 18533554 ~ 18533859 (-) | True | G1349314 |
| TU1542560 | lncRNA | upstream | 505 | 18579291 ~ 18579519 (-) | True | G1349342 |
| TU1542564 | lncRNA | upstream | 5000 | 18583786 ~ 18584017 (-) | True | G1349346 |
| TU1542565 | lncRNA | upstream | 5349 | 18584135 ~ 18584359 (-) | True | G1349347 |
| TU1542567 | lncRNA | upstream | 6658 | 18585444 ~ 18585782 (-) | True | G1349349 |
| TU1542511 | lncRNA | upstream | 15397 | 18594183 ~ 18595609 (-) | True | G1349308 |
| XM_021565008.2 | mRNA | downstream | 3044 | 18553176 ~ 18575510 (-) | False | ttll6 |
| XM_021565011.2 | mRNA | downstream | 3044 | 18553176 ~ 18575510 (-) | False | ttll6 |
| XM_036946380.1 | mRNA | downstream | 3044 | 18553177 ~ 18575510 (-) | False | ttll6 |
| XM_036945852.1 | mRNA | downstream | 25583 | 18551195 ~ 18552971 (-) | True | LOC110492883 |
| XM_021565007.2 | mRNA | downstream | 32382 | 18543964 ~ 18546172 (-) | True | LOC110491508 |
| XM_036946381.1 | mRNA | upstream | 16865 | 18595651 ~ 18602193 (-) | False | snf8 |
| XM_021565018.2 | mRNA | upstream | 16865 | 18595651 ~ 18603129 (-) | True | snf8 |
| XM_036946382.1 | mRNA | upstream | 26199 | 18604985 ~ 18606174 (-) | True | LOC118939514 |
| XM_036945761.1 | mRNA | upstream | 43847 | 18622633 ~ 18625717 (-) | False | chmp2a |
| NM_001165070.2 | mRNA | upstream | 43848 | 18622634 ~ 18626440 (-) | False | chmp2a |
| TU1541907 | other | downstream | 155368 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1540612 | other | downstream | 1186600 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 1382425 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539999 | other | downstream | 1649122 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1542585 | other | upstream | 55245 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 742084 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 882255 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 1112906 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
| TU1545321 | other | upstream | 1751614 | 20330400 ~ 20333729 (-) | True | LOC110491567 |
