Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1543186 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G1349899 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 19463518 ~ 19463744 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1543182 | lncRNA | downstream | 4259 | 19458918 ~ 19459259 (-) | True | G1349895 |
| TU1543171 | lncRNA | downstream | 11972 | 19451240 ~ 19451546 (-) | True | G1349884 |
| TU1543166 | lncRNA | downstream | 14964 | 19448287 ~ 19448554 (-) | True | G1349879 |
| TU1543158 | lncRNA | downstream | 22315 | 19440941 ~ 19441203 (-) | True | G1349871 |
| TU1543104 | lncRNA | downstream | 61898 | 19401364 ~ 19401620 (-) | True | G1349820 |
| TU1543187 | lncRNA | upstream | 154 | 19463898 ~ 19464182 (-) | True | G1349900 |
| TU1543711 | lncRNA | upstream | 14904 | 19478648 ~ 19516775 (-) | True | G1350361 |
| TU1543758 | lncRNA | upstream | 89554 | 19553298 ~ 19553596 (-) | True | G1350408 |
| TU1543802 | lncRNA | upstream | 168849 | 19632593 ~ 19633773 (-) | True | G1350445 |
| TU1543808 | lncRNA | upstream | 179404 | 19643148 ~ 19643768 (-) | True | G1350450 |
| XM_021565079.2 | mRNA | downstream | 23759 | 19437195 ~ 19439759 (-) | True | LOC110491546 |
| XR_002468846.2 | mRNA | downstream | 31199 | 19411518 ~ 19432319 (-) | True | LOC110491545 |
| XM_021565076.2 | mRNA | downstream | 121379 | 19340326 ~ 19342139 (-) | True | LOC110491543 |
| XM_021565071.2 | mRNA | downstream | 138424 | 19310970 ~ 19325094 (-) | False | LOC110491541 |
| XM_021567323.2 | mRNA | downstream | 184183 | 19244110 ~ 19279335 (-) | True | sema4gb |
| XM_036946428.1 | mRNA | upstream | 91348 | 19555092 ~ 19581659 (-) | False | LOC110491548 |
| XM_021565081.2 | mRNA | upstream | 91348 | 19555092 ~ 19590896 (-) | True | LOC110491548 |
| XM_021565087.2 | mRNA | upstream | 172592 | 19636336 ~ 19653981 (-) | False | mpp2b |
| XM_036946431.1 | mRNA | upstream | 172592 | 19636336 ~ 19676499 (-) | False | mpp2b |
| XM_021565085.2 | mRNA | upstream | 172592 | 19636336 ~ 19691342 (-) | False | mpp2b |
| TU1543183 | other | downstream | 1703 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1542973 | other | downstream | 138464 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1542585 | other | downstream | 829113 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1541907 | other | downstream | 1040332 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1540612 | other | downstream | 2071564 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1543843 | other | upstream | 227948 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
| TU1545321 | other | upstream | 866656 | 20330400 ~ 20333729 (-) | True | LOC110491567 |
| TU1545473 | other | upstream | 1176482 | 20640226 ~ 20646198 (-) | True | LOC110491585 |
| TU1545462 | other | upstream | 1356955 | 20820699 ~ 20823122 (-) | False | h3f3d |
| TU1545463 | other | upstream | 1356955 | 20820699 ~ 20823122 (-) | True | h3f3d |
