Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1544958 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1351443 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 21575014 ~ 21575231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1544912 | lncRNA | upstream | 8567 | 21566268 ~ 21566447 (+) | True | G1351401 |
| TU1544820 | lncRNA | upstream | 286664 | 21287565 ~ 21288350 (+) | False | G1351318 |
| TU1544814 | lncRNA | upstream | 286726 | 21287565 ~ 21288288 (+) | False | G1351318 |
| TU1544816 | lncRNA | upstream | 286726 | 21287609 ~ 21288288 (+) | False | G1351318 |
| TU1544817 | lncRNA | upstream | 286756 | 21287609 ~ 21288258 (+) | True | G1351318 |
| TU1544966 | lncRNA | downstream | 8769 | 21584000 ~ 21584319 (+) | True | G1351451 |
| TU1544976 | lncRNA | downstream | 21411 | 21596642 ~ 21597102 (+) | True | G1351460 |
| TU1544977 | lncRNA | downstream | 22680 | 21597911 ~ 21598110 (+) | True | G1351461 |
| TU1544989 | lncRNA | downstream | 42270 | 21617501 ~ 21623039 (+) | True | G1351470 |
| TU1544971 | lncRNA | downstream | 51082 | 21626313 ~ 21628686 (+) | True | G1351455 |
| XM_021565196.2 | mRNA | upstream | 131462 | 21431166 ~ 21443552 (+) | True | ccdc78 |
| XM_021565195.2 | mRNA | upstream | 144667 | 21375104 ~ 21430347 (+) | True | ift140 |
| XM_021565192.2 | mRNA | upstream | 223258 | 21307752 ~ 21351756 (+) | False | rab11fip3 |
| XM_021567357.2 | mRNA | downstream | 32666 | 21607897 ~ 21608814 (+) | True | LOC110492885 |
| XM_021567326.2 | mRNA | downstream | 34562 | 21609793 ~ 21610638 (+) | True | LOC110492851 |
| XM_036946495.1 | mRNA | downstream | 152386 | 21727617 ~ 22001169 (+) | False | LOC110491629 |
| XM_036946493.1 | mRNA | downstream | 177132 | 21752363 ~ 22001169 (+) | False | LOC110491629 |
| XM_036946492.1 | mRNA | downstream | 177133 | 21752364 ~ 22001169 (+) | False | LOC110491629 |
| TU1544874 | other | upstream | 169897 | 21402227 ~ 21405117 (+) | True | G1351366 |
| TU1544755 | other | upstream | 353867 | 21220765 ~ 21221147 (+) | True | G1351274 |
| TU1543613 | other | upstream | 1537036 | 20030730 ~ 20037978 (+) | True | G1350275 |
| TU1543395 | other | upstream | 1836980 | 19737162 ~ 19738034 (+) | True | G1350066 |
| TU1542335 | other | upstream | 2433337 | 19139027 ~ 19141677 (+) | True | LOC110491534 |
| TU1545030 | other | downstream | 103993 | 21679224 ~ 21680881 (+) | True | G1351501 |
| TU1545079 | other | downstream | 424126 | 21999357 ~ 22000251 (+) | False | LOC110491629 |
| TU1546739 | other | downstream | 1056648 | 22631879 ~ 22632305 (+) | True | G1353021 |
| TU1547300 | other | downstream | 1470038 | 23045269 ~ 23045884 (+) | True | G1353519 |
| TU1547339 | other | downstream | 1548628 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
