Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1547954 |
| length | 303 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G1354115 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 23454181 ~ 23460517 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1547916 | lncRNA | upstream | 59149 | 23390762 ~ 23395032 (+) | True | G1354084 |
| TU1547913 | lncRNA | upstream | 68012 | 23385804 ~ 23386169 (+) | True | G1354081 |
| TU1547912 | lncRNA | upstream | 68552 | 23385014 ~ 23385629 (+) | True | G1354080 |
| TU1547902 | lncRNA | upstream | 79951 | 23373987 ~ 23374230 (+) | True | G1354070 |
| TU1547897 | lncRNA | upstream | 83843 | 23370101 ~ 23370338 (+) | True | G1354065 |
| TU1547975 | lncRNA | downstream | 44669 | 23505186 ~ 23506816 (+) | True | G1354136 |
| TU1548042 | lncRNA | downstream | 137100 | 23597617 ~ 23620902 (+) | False | G1354199 |
| TU1548041 | lncRNA | downstream | 155927 | 23616444 ~ 23620902 (+) | True | G1354199 |
| TU1548062 | lncRNA | downstream | 243382 | 23703899 ~ 23712056 (+) | True | G1354215 |
| TU1548009 | lncRNA | downstream | 321932 | 23782449 ~ 23784110 (+) | True | G1354168 |
| XM_021565291.2 | mRNA | upstream | 49557 | 23399396 ~ 23404624 (+) | True | LOC110491669 |
| XM_036946552.1 | mRNA | upstream | 189872 | 23248663 ~ 23264309 (+) | False | LOC110491666 |
| XM_036946553.1 | mRNA | upstream | 190757 | 23248659 ~ 23263424 (+) | False | LOC110491666 |
| XM_021565280.2 | mRNA | upstream | 218891 | 23217414 ~ 23235290 (+) | False | LOC110491663 |
| NM_001124429.1 | mRNA | downstream | 91276 | 23551793 ~ 23566332 (+) | False | becn1 |
| XM_021564381.2 | mRNA | downstream | 91741 | 23552258 ~ 23567658 (+) | True | becn1 |
| trnag-ccc-4 | mRNA | downstream | 130181 | 23590698 ~ 23590769 (+) | True | trnag-ccc-4 |
| trnaw-cca-8 | mRNA | downstream | 131359 | 23591876 ~ 23591947 (+) | True | trnaw-cca-8 |
| trnaw-cca-9 | mRNA | downstream | 133725 | 23594242 ~ 23594313 (+) | True | trnaw-cca-9 |
| TU1547458 | other | upstream | 155428 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547339 | other | upstream | 327870 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1547300 | other | upstream | 408297 | 23045269 ~ 23045884 (+) | True | G1353519 |
| TU1546739 | other | upstream | 821876 | 22631879 ~ 22632305 (+) | True | G1353021 |
| TU1545079 | other | upstream | 1453930 | 21999357 ~ 22000251 (+) | False | LOC110491629 |
| TU1547936 | other | downstream | 19572 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1548546 | other | downstream | 533101 | 23993618 ~ 23995021 (+) | True | G1354668 |
| TU1548560 | other | downstream | 625191 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1549199 | other | downstream | 1209922 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1549194 | other | downstream | 1210082 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
