Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1548062 |
| length | 259 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1354215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 23703899 ~ 23712056 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1548042 | lncRNA | upstream | 82997 | 23597617 ~ 23620902 (+) | False | G1354199 |
| TU1548041 | lncRNA | upstream | 82997 | 23616444 ~ 23620902 (+) | True | G1354199 |
| TU1547975 | lncRNA | upstream | 197083 | 23505186 ~ 23506816 (+) | True | G1354136 |
| TU1547954 | lncRNA | upstream | 243382 | 23454181 ~ 23460517 (+) | True | G1354115 |
| TU1547952 | lncRNA | upstream | 244527 | 23453127 ~ 23459372 (+) | True | G1354114 |
| TU1548009 | lncRNA | downstream | 70393 | 23782449 ~ 23784110 (+) | True | G1354168 |
| TU1548134 | lncRNA | downstream | 115846 | 23827902 ~ 23916365 (+) | True | G1354281 |
| TU1548139 | lncRNA | downstream | 122803 | 23834859 ~ 23859610 (+) | True | G1354286 |
| TU1548013 | lncRNA | downstream | 139267 | 23851323 ~ 23856448 (+) | True | G1354172 |
| TU1548154 | lncRNA | downstream | 155876 | 23867932 ~ 23869808 (+) | True | G1354301 |
| trnaw-cca-55 | mRNA | upstream | 18150 | 23685678 ~ 23685749 (+) | True | trnaw-cca-55 |
| trnaw-cca-54 | mRNA | upstream | 19382 | 23684446 ~ 23684517 (+) | True | trnaw-cca-54 |
| trnaw-cca-53 | mRNA | upstream | 22522 | 23681306 ~ 23681377 (+) | True | trnaw-cca-53 |
| trnaw-cca-52 | mRNA | upstream | 23599 | 23680229 ~ 23680300 (+) | True | trnaw-cca-52 |
| trnaw-cca-51 | mRNA | upstream | 25391 | 23678437 ~ 23678508 (+) | True | trnaw-cca-51 |
| XM_021565304.2 | mRNA | downstream | 185565 | 23897621 ~ 23901382 (+) | True | neurod2 |
| XM_021565305.2 | mRNA | downstream | 217771 | 23929827 ~ 23952690 (+) | True | med1 |
| XM_021565307.2 | mRNA | downstream | 390023 | 24102079 ~ 24147369 (+) | False | gpam |
| XM_036946572.1 | mRNA | downstream | 390041 | 24102097 ~ 24147369 (+) | True | gpam |
| XM_036946577.1 | mRNA | downstream | 454134 | 24166190 ~ 24201252 (+) | False | LOC110491683 |
| TU1547936 | other | upstream | 215287 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1547458 | other | upstream | 405146 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547339 | other | upstream | 577588 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1547300 | other | upstream | 658015 | 23045269 ~ 23045884 (+) | True | G1353519 |
| TU1546739 | other | upstream | 1071594 | 22631879 ~ 22632305 (+) | True | G1353021 |
| TU1548546 | other | downstream | 281562 | 23993618 ~ 23995021 (+) | True | G1354668 |
| TU1548560 | other | downstream | 373652 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1549199 | other | downstream | 958383 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1549194 | other | downstream | 958543 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549200 | other | downstream | 969358 | 24681414 ~ 24683919 (+) | False | G1355273 |
