Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1548545 |
| length | 796 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1354667 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 23991925 ~ 23992720 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1548134 | lncRNA | upstream | 75560 | 23827902 ~ 23916365 (+) | True | G1354281 |
| TU1548154 | lncRNA | upstream | 122117 | 23867932 ~ 23869808 (+) | True | G1354301 |
| TU1548139 | lncRNA | upstream | 132315 | 23834859 ~ 23859610 (+) | True | G1354286 |
| TU1548013 | lncRNA | upstream | 135477 | 23851323 ~ 23856448 (+) | True | G1354172 |
| TU1548009 | lncRNA | upstream | 207815 | 23782449 ~ 23784110 (+) | True | G1354168 |
| TU1548547 | lncRNA | downstream | 163 | 23992883 ~ 23993194 (+) | True | G1354669 |
| TU1548551 | lncRNA | downstream | 10723 | 24003443 ~ 24003684 (+) | True | G1354673 |
| TU1548580 | lncRNA | downstream | 54099 | 24046819 ~ 24047201 (+) | True | G1354697 |
| TU1548585 | lncRNA | downstream | 60068 | 24052788 ~ 24053126 (+) | True | G1354702 |
| TU1548591 | lncRNA | downstream | 65354 | 24058074 ~ 24058343 (+) | True | G1354708 |
| XM_021565305.2 | mRNA | upstream | 39235 | 23929827 ~ 23952690 (+) | True | med1 |
| XM_021565304.2 | mRNA | upstream | 90543 | 23897621 ~ 23901382 (+) | True | neurod2 |
| trnaw-cca-55 | mRNA | upstream | 306176 | 23685678 ~ 23685749 (+) | True | trnaw-cca-55 |
| trnaw-cca-54 | mRNA | upstream | 307408 | 23684446 ~ 23684517 (+) | True | trnaw-cca-54 |
| trnaw-cca-53 | mRNA | upstream | 310548 | 23681306 ~ 23681377 (+) | True | trnaw-cca-53 |
| XM_021565307.2 | mRNA | downstream | 109359 | 24102079 ~ 24147369 (+) | False | gpam |
| XM_036946572.1 | mRNA | downstream | 109377 | 24102097 ~ 24147369 (+) | True | gpam |
| XM_036946577.1 | mRNA | downstream | 173470 | 24166190 ~ 24201252 (+) | False | LOC110491683 |
| XM_036946576.1 | mRNA | downstream | 173471 | 24166191 ~ 24201252 (+) | False | LOC110491683 |
| XR_005036482.1 | mRNA | downstream | 173471 | 24166191 ~ 24201252 (+) | False | LOC110491683 |
| TU1547936 | other | upstream | 503313 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1547458 | other | upstream | 693172 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547339 | other | upstream | 865614 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1547300 | other | upstream | 946041 | 23045269 ~ 23045884 (+) | True | G1353519 |
| TU1546739 | other | upstream | 1359620 | 22631879 ~ 22632305 (+) | True | G1353021 |
| TU1548546 | other | downstream | 898 | 23993618 ~ 23995021 (+) | True | G1354668 |
| TU1548560 | other | downstream | 92988 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1549199 | other | downstream | 677719 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1549194 | other | downstream | 677879 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549200 | other | downstream | 688694 | 24681414 ~ 24683919 (+) | False | G1355273 |
