Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1548616 |
| length | 224 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1354733 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24100666 ~ 24100889 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1548612 | lncRNA | upstream | 6669 | 24093550 ~ 24093997 (+) | True | G1354729 |
| TU1548594 | lncRNA | upstream | 38470 | 24061993 ~ 24062196 (+) | True | G1354711 |
| TU1548591 | lncRNA | upstream | 42323 | 24058074 ~ 24058343 (+) | True | G1354708 |
| TU1548585 | lncRNA | upstream | 47540 | 24052788 ~ 24053126 (+) | True | G1354702 |
| TU1548580 | lncRNA | upstream | 53465 | 24046819 ~ 24047201 (+) | True | G1354697 |
| TU1548653 | lncRNA | downstream | 75330 | 24176219 ~ 24176797 (+) | True | G1354769 |
| TU1548657 | lncRNA | downstream | 86376 | 24187265 ~ 24208476 (+) | True | G1354772 |
| TU1548665 | lncRNA | downstream | 141657 | 24242546 ~ 24242989 (+) | False | kcnh4b |
| TU1548681 | lncRNA | downstream | 146251 | 24247140 ~ 24247407 (+) | True | G1354796 |
| TU1548697 | lncRNA | downstream | 171201 | 24272090 ~ 24272358 (+) | True | G1354812 |
| XM_021565305.2 | mRNA | upstream | 147976 | 23929827 ~ 23952690 (+) | True | med1 |
| XM_021565304.2 | mRNA | upstream | 199284 | 23897621 ~ 23901382 (+) | True | neurod2 |
| trnaw-cca-55 | mRNA | upstream | 414917 | 23685678 ~ 23685749 (+) | True | trnaw-cca-55 |
| trnaw-cca-54 | mRNA | upstream | 416149 | 23684446 ~ 23684517 (+) | True | trnaw-cca-54 |
| trnaw-cca-53 | mRNA | upstream | 419289 | 23681306 ~ 23681377 (+) | True | trnaw-cca-53 |
| XM_021565307.2 | mRNA | downstream | 1190 | 24102079 ~ 24147369 (+) | False | gpam |
| XM_036946572.1 | mRNA | downstream | 1208 | 24102097 ~ 24147369 (+) | True | gpam |
| XM_036946577.1 | mRNA | downstream | 65301 | 24166190 ~ 24201252 (+) | False | LOC110491683 |
| XM_036946576.1 | mRNA | downstream | 65302 | 24166191 ~ 24201252 (+) | False | LOC110491683 |
| XR_005036482.1 | mRNA | downstream | 65302 | 24166191 ~ 24201252 (+) | False | LOC110491683 |
| TU1548560 | other | upstream | 10632 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1548546 | other | upstream | 105645 | 23993618 ~ 23995021 (+) | True | G1354668 |
| TU1547936 | other | upstream | 612054 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1547458 | other | upstream | 801913 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547339 | other | upstream | 974355 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1549199 | other | downstream | 569550 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1549194 | other | downstream | 569710 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549200 | other | downstream | 580525 | 24681414 ~ 24683919 (+) | False | G1355273 |
| TU1549230 | other | downstream | 663750 | 24764639 ~ 24783512 (+) | True | dcakd |
| TU1550905 | other | downstream | 1975652 | 26076541 ~ 26089383 (+) | True | znf281b |
