Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1548706 |
| length | 228 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1354819 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24281811 ~ 24282038 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1548705 | lncRNA | upstream | 310 | 24281278 ~ 24281501 (+) | True | G1354818 |
| TU1548697 | lncRNA | upstream | 9453 | 24272090 ~ 24272358 (+) | True | G1354812 |
| TU1548681 | lncRNA | upstream | 34404 | 24247140 ~ 24247407 (+) | True | G1354796 |
| TU1548665 | lncRNA | upstream | 38822 | 24242546 ~ 24242989 (+) | False | kcnh4b |
| TU1548657 | lncRNA | upstream | 73335 | 24187265 ~ 24208476 (+) | True | G1354772 |
| TU1548707 | lncRNA | downstream | 429 | 24282467 ~ 24282671 (+) | True | G1354820 |
| TU1548663 | lncRNA | downstream | 28747 | 24310785 ~ 24311995 (+) | True | kcnh4b |
| TU1548715 | lncRNA | downstream | 47470 | 24329508 ~ 24330130 (+) | True | G1354827 |
| TU1548722 | lncRNA | downstream | 56552 | 24338590 ~ 24338795 (+) | True | G1354834 |
| TU1548725 | lncRNA | downstream | 58190 | 24340228 ~ 24340617 (+) | True | G1354837 |
| XM_021565314.2 | mRNA | upstream | 47142 | 24212179 ~ 24234669 (+) | False | ghdc |
| XM_021565315.2 | mRNA | upstream | 47142 | 24212244 ~ 24234669 (+) | False | ghdc |
| XM_036946579.1 | mRNA | upstream | 47142 | 24212312 ~ 24234669 (+) | False | ghdc |
| XM_021565313.2 | mRNA | upstream | 47142 | 24212611 ~ 24234669 (+) | True | ghdc |
| XM_036946578.1 | mRNA | upstream | 80559 | 24166193 ~ 24201252 (+) | True | LOC110491683 |
| XM_036946585.1 | mRNA | downstream | 67971 | 24350009 ~ 24363391 (+) | False | LOC110491689 |
| XM_036946586.1 | mRNA | downstream | 68369 | 24350407 ~ 24363391 (+) | False | LOC110491689 |
| XM_021565322.2 | mRNA | downstream | 69166 | 24351204 ~ 24363389 (+) | False | LOC110491689 |
| XM_021565323.2 | mRNA | downstream | 69183 | 24351221 ~ 24363389 (+) | False | LOC110491689 |
| XM_021565324.2 | mRNA | downstream | 69188 | 24351226 ~ 24363389 (+) | True | LOC110491689 |
| TU1548560 | other | upstream | 191777 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1548546 | other | upstream | 286790 | 23993618 ~ 23995021 (+) | True | G1354668 |
| TU1547936 | other | upstream | 793199 | 23480089 ~ 23488612 (+) | True | LOC110491671 |
| TU1547458 | other | upstream | 983058 | 23298457 ~ 23298753 (+) | True | G1353660 |
| TU1547339 | other | upstream | 1155500 | 23123859 ~ 23126311 (+) | False | LOC110491658 |
| TU1549199 | other | downstream | 388401 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1549194 | other | downstream | 388561 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549200 | other | downstream | 399376 | 24681414 ~ 24683919 (+) | False | G1355273 |
| TU1549230 | other | downstream | 482601 | 24764639 ~ 24783512 (+) | True | dcakd |
| TU1550905 | other | downstream | 1794503 | 26076541 ~ 26089383 (+) | True | znf281b |
