Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1549317 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1355377 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24901051 ~ 24901362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1549312 | lncRNA | upstream | 3310 | 24896433 ~ 24897741 (+) | True | ifn5 |
| TU1549313 | lncRNA | upstream | 4271 | 24890427 ~ 24896780 (+) | False | ifn5 |
| TU1549304 | lncRNA | upstream | 19958 | 24880828 ~ 24881093 (+) | True | G1355366 |
| TU1549295 | lncRNA | upstream | 28439 | 24872029 ~ 24872612 (+) | True | G1355357 |
| TU1549294 | lncRNA | upstream | 29763 | 24870960 ~ 24871288 (+) | True | G1355356 |
| TU1549335 | lncRNA | downstream | 37426 | 24938788 ~ 24939064 (+) | True | G1355394 |
| TU1549379 | lncRNA | downstream | 100277 | 25001639 ~ 25002613 (+) | True | G1355435 |
| TU1549387 | lncRNA | downstream | 109650 | 25011012 ~ 25011482 (+) | True | G1355443 |
| TU1549390 | lncRNA | downstream | 114856 | 25016218 ~ 25016540 (+) | True | G1355446 |
| TU1549393 | lncRNA | downstream | 122392 | 25023754 ~ 25024012 (+) | True | G1355449 |
| XM_021564390.2 | mRNA | upstream | 8380 | 24889101 ~ 24892671 (+) | False | ifn5 |
| NM_001159339.1 | mRNA | upstream | 8380 | 24890022 ~ 24892671 (+) | False | ifn5 |
| XM_021567359.2 | mRNA | upstream | 39921 | 24857512 ~ 24861130 (+) | True | ccr10 |
| XM_036946590.1 | mRNA | upstream | 71733 | 24826164 ~ 24829318 (+) | False | LOC110491705 |
| trnaa-ugc-127 | mRNA | downstream | 129967 | 25031329 ~ 25031399 (+) | True | trnaa-ugc-127 |
| XM_021565361.2 | mRNA | downstream | 144330 | 25045692 ~ 25090054 (+) | False | mapta |
| XM_021565371.2 | mRNA | downstream | 144394 | 25045756 ~ 25090054 (+) | False | mapta |
| XM_021565380.2 | mRNA | downstream | 144394 | 25045756 ~ 25090119 (+) | False | mapta |
| XM_021565353.2 | mRNA | downstream | 144394 | 25045756 ~ 25092985 (+) | False | mapta |
| TU1549230 | other | upstream | 117539 | 24764639 ~ 24783512 (+) | True | dcakd |
| TU1549200 | other | upstream | 217132 | 24681414 ~ 24683919 (+) | False | G1355273 |
| TU1549194 | other | upstream | 219936 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549199 | other | upstream | 220332 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1548560 | other | upstream | 811017 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1550905 | other | downstream | 1175179 | 26076541 ~ 26089383 (+) | True | znf281b |
| TU1551395 | other | downstream | 1403589 | 26304951 ~ 26314801 (+) | False | mpp3b |
| TU1551392 | other | downstream | 1405130 | 26306492 ~ 26314801 (+) | False | mpp3b |
| TU1551396 | other | downstream | 1410334 | 26311696 ~ 26314801 (+) | False | mpp3b |
| TU1551398 | other | downstream | 1410334 | 26311696 ~ 26314801 (+) | True | mpp3b |
