Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1550817 |
| length | 257 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G1356754 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 25953892 ~ 25954148 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1550719 | lncRNA | upstream | 165921 | 25787713 ~ 25787971 (+) | True | G1356665 |
| TU1550414 | lncRNA | upstream | 169696 | 25783846 ~ 25784196 (+) | True | G1356395 |
| TU1550282 | lncRNA | upstream | 349315 | 25604245 ~ 25604577 (+) | True | G1356272 |
| TU1550102 | lncRNA | upstream | 649367 | 25304268 ~ 25304525 (+) | True | G1356111 |
| TU1550085 | lncRNA | upstream | 662956 | 25290705 ~ 25290936 (+) | True | G1356094 |
| TU1550818 | lncRNA | downstream | 687 | 25954835 ~ 25955064 (+) | True | G1356755 |
| TU1550849 | lncRNA | downstream | 50290 | 26004438 ~ 26069048 (+) | True | G1356780 |
| TU1550998 | lncRNA | downstream | 249697 | 26203845 ~ 26281363 (+) | True | lrp2b |
| TU1551031 | lncRNA | downstream | 282418 | 26236566 ~ 26243680 (+) | True | G1356917 |
| TU1551390 | lncRNA | downstream | 328093 | 26282241 ~ 26282589 (+) | True | G1357249 |
| XM_036946614.1 | mRNA | upstream | 46886 | 25795973 ~ 25907006 (+) | False | svild |
| XM_036946612.1 | mRNA | upstream | 46886 | 25795974 ~ 25907006 (+) | False | svild |
| XM_021565408.2 | mRNA | upstream | 46886 | 25795975 ~ 25907006 (+) | False | svild |
| XM_036946613.1 | mRNA | upstream | 46886 | 25813172 ~ 25907006 (+) | False | svild |
| XM_021565413.2 | mRNA | upstream | 46886 | 25838841 ~ 25907006 (+) | True | svild |
| XM_021565415.2 | mRNA | downstream | 122313 | 26076461 ~ 26107407 (+) | False | znf281b |
| XM_021565416.2 | mRNA | downstream | 122313 | 26076461 ~ 26107407 (+) | False | znf281b |
| XM_021565417.2 | mRNA | downstream | 122314 | 26076462 ~ 26107407 (+) | False | znf281b |
| XM_036946615.1 | mRNA | downstream | 178845 | 26132993 ~ 26166321 (+) | True | muc13b |
| XM_021565420.2 | mRNA | downstream | 232667 | 26186815 ~ 26281357 (+) | False | lrp2b |
| TU1549230 | other | upstream | 1170380 | 24764639 ~ 24783512 (+) | True | dcakd |
| TU1549200 | other | upstream | 1269973 | 24681414 ~ 24683919 (+) | False | G1355273 |
| TU1549194 | other | upstream | 1272777 | 24670599 ~ 24681115 (+) | True | LOC110491698 |
| TU1549199 | other | upstream | 1273173 | 24670439 ~ 24680719 (+) | False | LOC110491698 |
| TU1548560 | other | upstream | 1863858 | 24085708 ~ 24090034 (+) | True | G1354681 |
| TU1550905 | other | downstream | 122393 | 26076541 ~ 26089383 (+) | True | znf281b |
| TU1551395 | other | downstream | 350803 | 26304951 ~ 26314801 (+) | False | mpp3b |
| TU1551392 | other | downstream | 352344 | 26306492 ~ 26314801 (+) | False | mpp3b |
| TU1551396 | other | downstream | 357548 | 26311696 ~ 26314801 (+) | False | mpp3b |
| TU1551398 | other | downstream | 357548 | 26311696 ~ 26314801 (+) | True | mpp3b |
