Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1552570 |
| length | 365 |
| lncRNA type | antisense_over |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G1358342 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 27509618 ~ 27510435 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1552515 | lncRNA | upstream | 168416 | 27332970 ~ 27341202 (+) | True | LOC110491761 |
| TU1552466 | lncRNA | upstream | 257446 | 27251269 ~ 27252172 (+) | True | G1358245 |
| TU1552443 | lncRNA | upstream | 311372 | 27198031 ~ 27198246 (+) | True | G1358223 |
| TU1552441 | lncRNA | upstream | 314947 | 27194464 ~ 27194671 (+) | True | G1358221 |
| TU1552437 | lncRNA | upstream | 318900 | 27190482 ~ 27190718 (+) | True | G1358217 |
| TU1552625 | lncRNA | downstream | 29125 | 27539560 ~ 27539829 (+) | True | G1358397 |
| TU1552626 | lncRNA | downstream | 31264 | 27541699 ~ 27541936 (+) | True | G1358398 |
| TU1552683 | lncRNA | downstream | 90080 | 27600515 ~ 27601054 (+) | True | G1358437 |
| TU1552653 | lncRNA | downstream | 150294 | 27660729 ~ 27759730 (+) | True | G1358411 |
| TU1552657 | lncRNA | downstream | 158414 | 27668849 ~ 27687905 (+) | True | G1358412 |
| XM_021567338.2 | mRNA | upstream | 4984 | 27501331 ~ 27504634 (+) | False | LOC110492863 |
| XM_036946675.1 | mRNA | upstream | 4984 | 27501331 ~ 27504634 (+) | False | LOC110492863 |
| XM_036946676.1 | mRNA | upstream | 4984 | 27501331 ~ 27504634 (+) | True | LOC110492863 |
| XM_036946644.1 | mRNA | upstream | 8731 | 27431151 ~ 27500887 (+) | False | cmn |
| XM_036946645.1 | mRNA | upstream | 8731 | 27431151 ~ 27500887 (+) | False | cmn |
| XM_021565505.2 | mRNA | downstream | 50706 | 27561141 ~ 27595350 (+) | False | LOC110491768 |
| XM_021565506.2 | mRNA | downstream | 64095 | 27574530 ~ 27595350 (+) | False | LOC110491768 |
| XM_036946678.1 | mRNA | downstream | 84993 | 27595428 ~ 27646077 (+) | True | sult1st6 |
| XM_021565511.2 | mRNA | downstream | 192948 | 27703383 ~ 27727796 (+) | True | LOC110491774 |
| XM_036946681.1 | mRNA | downstream | 265847 | 27776282 ~ 27823581 (+) | False | LOC110491775 |
| TU1552517 | other | upstream | 177343 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551395 | other | upstream | 1194817 | 26304951 ~ 26314801 (+) | False | mpp3b |
| TU1552634 | other | downstream | 50712 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552849 | other | downstream | 392615 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552979 | other | downstream | 536247 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1555703 | other | downstream | 2292219 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 2433006 | 29943441 ~ 29943756 (+) | True | G1361671 |
