Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1553261 |
| length | 354 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1358944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28473878 ~ 28474231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1553141 | lncRNA | upstream | 174985 | 28298269 ~ 28298893 (+) | True | G1358839 |
| TU1553040 | lncRNA | upstream | 292801 | 28177295 ~ 28181077 (+) | True | G1358757 |
| TU1553007 | lncRNA | upstream | 346393 | 28103165 ~ 28127485 (+) | True | G1358725 |
| TU1552942 | lncRNA | upstream | 438980 | 28020384 ~ 28034898 (+) | True | G1358671 |
| TU1552925 | lncRNA | upstream | 469354 | 28002309 ~ 28004524 (+) | True | G1358656 |
| TU1553260 | lncRNA | downstream | 663 | 28474894 ~ 28478300 (+) | True | G1358943 |
| TU1553263 | lncRNA | downstream | 61087 | 28535318 ~ 28538683 (+) | False | G1358945 |
| TU1553264 | lncRNA | downstream | 61087 | 28535318 ~ 28540660 (+) | False | G1358945 |
| TU1553265 | lncRNA | downstream | 61087 | 28535318 ~ 28540660 (+) | False | G1358945 |
| TU1553271 | lncRNA | downstream | 64821 | 28539052 ~ 28540660 (+) | True | G1358945 |
| XM_021565535.2 | mRNA | upstream | 186070 | 28278657 ~ 28287808 (+) | False | nif3l1 |
| XM_021565536.2 | mRNA | upstream | 186070 | 28278770 ~ 28287808 (+) | True | nif3l1 |
| XM_036945853.1 | mRNA | upstream | 207856 | 28260283 ~ 28266022 (+) | True | cabp5a |
| XM_021565522.2 | mRNA | upstream | 392507 | 28049494 ~ 28081371 (+) | False | pagr1 |
| XM_021567340.2 | mRNA | downstream | 105138 | 28579369 ~ 28607901 (+) | True | LOC110492866 |
| XM_021565557.2 | mRNA | downstream | 359133 | 28833364 ~ 28857801 (+) | False | si:ch211-214e3.5 |
| XM_021565558.2 | mRNA | downstream | 359133 | 28833364 ~ 28857801 (+) | False | si:ch211-214e3.5 |
| XM_036946706.1 | mRNA | downstream | 359133 | 28833364 ~ 28857801 (+) | False | si:ch211-214e3.5 |
| XM_036946704.1 | mRNA | downstream | 359172 | 28833403 ~ 28857801 (+) | False | si:ch211-214e3.5 |
| TU1552979 | other | upstream | 426488 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1552849 | other | upstream | 528037 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552634 | other | upstream | 896786 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552517 | other | upstream | 1141603 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551398 | other | upstream | 2159077 | 26311696 ~ 26314801 (+) | True | mpp3b |
| TU1555703 | other | downstream | 1328423 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 1469210 | 29943441 ~ 29943756 (+) | True | G1361671 |
| TU1557278 | other | downstream | 2229416 | 30703647 ~ 30704108 (+) | True | LOC110492869 |
| TU1557509 | other | downstream | 2480378 | 30954609 ~ 30955975 (+) | True | G1362902 |
| TU1558037 | other | downstream | 2760262 | 31234493 ~ 31235386 (+) | True | G1363401 |
