Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1554667 |
| length | 610 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1360233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28848645 ~ 28849254 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1554658 | lncRNA | upstream | 886 | 28847552 ~ 28847759 (+) | True | G1360227 |
| TU1554657 | lncRNA | upstream | 1180 | 28847129 ~ 28847465 (+) | True | G1360226 |
| TU1554655 | lncRNA | upstream | 2593 | 28845846 ~ 28846052 (+) | True | G1360224 |
| TU1554649 | lncRNA | upstream | 5040 | 28833415 ~ 28843605 (+) | False | si:ch211-214e3.5 |
| TU1554621 | lncRNA | upstream | 30390 | 28818050 ~ 28818255 (+) | True | G1360190 |
| TU1554669 | lncRNA | downstream | 334 | 28849588 ~ 28850244 (+) | True | G1360235 |
| TU1554670 | lncRNA | downstream | 2665 | 28851919 ~ 28852152 (+) | True | G1360236 |
| TU1554648 | lncRNA | downstream | 7224 | 28856478 ~ 28856799 (+) | True | si:ch211-214e3.5 |
| TU1554672 | lncRNA | downstream | 15455 | 28864709 ~ 28865439 (+) | True | G1360238 |
| TU1554678 | lncRNA | downstream | 23799 | 28873053 ~ 28873278 (+) | True | G1360243 |
| XM_021567340.2 | mRNA | upstream | 240744 | 28579369 ~ 28607901 (+) | True | LOC110492866 |
| XM_021565535.2 | mRNA | upstream | 560837 | 28278657 ~ 28287808 (+) | False | nif3l1 |
| XM_021565536.2 | mRNA | upstream | 560837 | 28278770 ~ 28287808 (+) | True | nif3l1 |
| XM_036945853.1 | mRNA | upstream | 582623 | 28260283 ~ 28266022 (+) | True | cabp5a |
| XM_021565525.2 | mRNA | upstream | 767274 | 28049499 ~ 28081371 (+) | True | pagr1 |
| XM_021565559.2 | mRNA | downstream | 75563 | 28924817 ~ 29353460 (+) | True | nrg3b |
| XM_036946708.1 | mRNA | downstream | 575087 | 29424341 ~ 29480114 (+) | True | LOC110491795 |
| XM_021564413.2 | mRNA | downstream | 632390 | 29481644 ~ 29492902 (+) | False | irf3 |
| NM_001257262.1 | mRNA | downstream | 632470 | 29481724 ~ 29492457 (+) | True | irf3 |
| XR_005036501.1 | mRNA | downstream | 654155 | 29503409 ~ 29511609 (+) | False | LOC110491796 |
| TU1552979 | other | upstream | 801255 | 28046682 ~ 28047390 (+) | True | G1358698 |
| TU1552849 | other | upstream | 902804 | 27903050 ~ 27945841 (+) | False | LOC110491776 |
| TU1552634 | other | upstream | 1271553 | 27561147 ~ 27577092 (+) | True | LOC110491768 |
| TU1552517 | other | upstream | 1516370 | 27329311 ~ 27332275 (+) | True | G1358292 |
| TU1551398 | other | upstream | 2533844 | 26311696 ~ 26314801 (+) | True | mpp3b |
| TU1555703 | other | downstream | 953400 | 29802654 ~ 29804368 (+) | True | G1361207 |
| TU1556224 | other | downstream | 1094187 | 29943441 ~ 29943756 (+) | True | G1361671 |
| TU1557278 | other | downstream | 1854393 | 30703647 ~ 30704108 (+) | True | LOC110492869 |
| TU1557509 | other | downstream | 2105355 | 30954609 ~ 30955975 (+) | True | G1362902 |
| TU1558037 | other | downstream | 2385239 | 31234493 ~ 31235386 (+) | True | G1363401 |
