Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1559068 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1364313 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 31946321 ~ 31946556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
31,944,000
31,944,400
31,944,800
31,945,200
31,945,600
31,946,000
31,946,400
31,946,800
31,947,200
31,947,600
31,948,000
31,948,400
NC_048580.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1558863 | lncRNA | downstream | 23938 | 31920896 ~ 31922383 (-) | True | G1364124 |
| TU1558860 | lncRNA | downstream | 26961 | 31913091 ~ 31919360 (-) | True | G1364123 |
| TU1558854 | lncRNA | downstream | 38831 | 31901494 ~ 31907490 (-) | True | G1364117 |
| TU1558855 | lncRNA | downstream | 43011 | 31899840 ~ 31903310 (-) | True | G1364118 |
| TU1558848 | lncRNA | downstream | 52355 | 31886501 ~ 31893966 (-) | True | G1364116 |
| TU1559112 | lncRNA | upstream | 70857 | 32017413 ~ 32017647 (-) | True | G1364347 |
| TU1559122 | lncRNA | upstream | 85338 | 32031894 ~ 32032230 (-) | True | G1364357 |
| TU1559123 | lncRNA | upstream | 85795 | 32032351 ~ 32032690 (-) | True | G1364358 |
| TU1559131 | lncRNA | upstream | 98035 | 32044591 ~ 32045093 (-) | True | G1364366 |
| TU1559106 | lncRNA | upstream | 108053 | 32054609 ~ 32056554 (-) | True | G1364341 |
| XM_021565602.2 | mRNA | downstream | 217378 | 31712301 ~ 31728943 (-) | True | si:ch211-28p3.4 |
| XM_036946722.1 | mRNA | downstream | 217397 | 31712301 ~ 31728924 (-) | False | si:ch211-28p3.4 |
| XM_036946721.1 | mRNA | downstream | 217398 | 31712301 ~ 31728923 (-) | False | si:ch211-28p3.4 |
| XR_005036505.1 | mRNA | downstream | 450021 | 31475320 ~ 31496300 (-) | True | LOC110491813 |
| XM_036946719.1 | mRNA | downstream | 450053 | 31474791 ~ 31496268 (-) | False | LOC110491813 |
| XM_021565604.2 | mRNA | upstream | 3963 | 31950519 ~ 31958001 (-) | False | ttc34 |
| XM_021565603.2 | mRNA | upstream | 3963 | 31950519 ~ 31958002 (-) | True | ttc34 |
| XM_036946723.1 | mRNA | upstream | 20166 | 31966722 ~ 31989796 (-) | False | LOC110491820 |
| XM_021565608.2 | mRNA | upstream | 20443 | 31966999 ~ 31989783 (-) | True | LOC110491820 |
| XM_021565612.2 | mRNA | upstream | 110392 | 32056948 ~ 32096133 (-) | True | LOC110491822 |
| TU1558829 | other | downstream | 60209 | 31885749 ~ 31886112 (-) | True | G1364105 |
| TU1558520 | other | downstream | 295624 | 31639437 ~ 31650697 (-) | True | G1363836 |
| TU1556170 | other | downstream | 2021167 | 29923871 ~ 29925154 (-) | True | G1361619 |
| TU1555797 | other | downstream | 2448766 | 29497113 ~ 29497555 (-) | True | G1361290 |
| TU1554186 | other | downstream | 3765381 | 28177715 ~ 28180940 (-) | True | taok2b |
| TU1559113 | other | upstream | 72238 | 32018794 ~ 32019498 (-) | True | G1364348 |
| TU1559908 | other | upstream | 687909 | 32634465 ~ 32635511 (-) | False | G1365099 |
| TU1559909 | other | upstream | 688007 | 32634563 ~ 32635511 (-) | True | G1365099 |
| TU1561599 | other | upstream | 1737455 | 33684011 ~ 33684473 (-) | True | G1366703 |
| TU1561654 | other | upstream | 1800844 | 33747400 ~ 33751407 (-) | True | G1366756 |
