Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1571372 |
| length | 241 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G1375479 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 41610117 ~ 41610357 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1571271 | lncRNA | downstream | 116040 | 41489002 ~ 41494077 (-) | True | G1375396 |
| TU1571270 | lncRNA | downstream | 127831 | 41481877 ~ 41482286 (-) | True | G1375395 |
| TU1570632 | lncRNA | downstream | 153506 | 41456386 ~ 41456611 (-) | True | G1374850 |
| TU1570569 | lncRNA | downstream | 209963 | 41363933 ~ 41400154 (-) | True | G1374790 |
| TU1570530 | lncRNA | downstream | 291465 | 41317180 ~ 41318652 (-) | False | G1374755 |
| TU1571405 | lncRNA | upstream | 119232 | 41729589 ~ 41733339 (-) | True | spryd3 |
| TU1571447 | lncRNA | upstream | 228069 | 41838426 ~ 41841200 (-) | True | G1375541 |
| TU1571471 | lncRNA | upstream | 241679 | 41852036 ~ 41852546 (-) | True | G1375561 |
| TU1571489 | lncRNA | upstream | 253875 | 41864232 ~ 41952990 (-) | True | G1375576 |
| TU1571496 | lncRNA | upstream | 275652 | 41886009 ~ 41887418 (-) | True | G1375583 |
| XM_036946909.1 | mRNA | downstream | 214449 | 41385586 ~ 41395668 (-) | True | calcoco1a |
| XM_036946910.1 | mRNA | downstream | 214738 | 41385586 ~ 41395379 (-) | False | calcoco1a |
| XM_021565897.2 | mRNA | downstream | 331120 | 41262830 ~ 41278997 (-) | True | LOC110491987 |
| XM_021565898.2 | mRNA | downstream | 356334 | 41249937 ~ 41253783 (-) | True | mfsd5 |
| XM_036946901.1 | mRNA | downstream | 356773 | 41249937 ~ 41253344 (-) | False | mfsd5 |
| XM_036946915.1 | mRNA | upstream | 27480 | 41637837 ~ 41645221 (-) | True | cbx5 |
| XM_021565933.2 | mRNA | upstream | 38840 | 41649197 ~ 41657737 (-) | True | nfe2 |
| XM_021565946.2 | mRNA | upstream | 77889 | 41688246 ~ 41696948 (-) | False | znf740b |
| XM_021565945.2 | mRNA | upstream | 77889 | 41688246 ~ 41697149 (-) | False | znf740b |
| XM_021565947.2 | mRNA | upstream | 77889 | 41688246 ~ 41697150 (-) | False | znf740b |
| TU1570242 | other | downstream | 580711 | 41026775 ~ 41029406 (-) | True | G1374491 |
| TU1570054 | other | downstream | 755528 | 40852758 ~ 40854589 (-) | True | rps26 |
| TU1569967 | other | downstream | 1084839 | 40522997 ~ 40525278 (-) | False | G1374237 |
| TU1571388 | other | upstream | 53391 | 41663748 ~ 41664049 (-) | True | G1375495 |
| TU1571475 | other | upstream | 244423 | 41854780 ~ 41855361 (-) | True | LOC110492013 |
| TU1572034 | other | upstream | 943202 | 42553559 ~ 42569326 (-) | True | LOC110492054 |
| TU1572237 | other | upstream | 1161949 | 42772306 ~ 42773296 (-) | True | LOC110492059 |
| TU1572712 | other | upstream | 1508531 | 43118888 ~ 43124166 (-) | True | LOC110491060 |
