Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1579490 |
| length | 1195 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1382841 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 48183023 ~ 48184217 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1579489 | lncRNA | downstream | 382 | 48181005 ~ 48182641 (-) | True | G1382840 |
| TU1579445 | lncRNA | downstream | 53797 | 48129004 ~ 48129226 (-) | True | G1382803 |
| TU1579435 | lncRNA | downstream | 70242 | 48112528 ~ 48112781 (-) | True | G1382793 |
| TU1579434 | lncRNA | downstream | 70802 | 48111984 ~ 48112221 (-) | True | G1382792 |
| TU1579408 | lncRNA | downstream | 159976 | 48022113 ~ 48023047 (-) | True | G1382767 |
| TU1579523 | lncRNA | upstream | 25394 | 48209611 ~ 48210096 (-) | True | LOC118939552 |
| TU1579526 | lncRNA | upstream | 29117 | 48213334 ~ 48213634 (-) | True | G1382872 |
| TU1579527 | lncRNA | upstream | 29487 | 48213704 ~ 48214110 (-) | True | G1382873 |
| TU1579529 | lncRNA | upstream | 33603 | 48217820 ~ 48218040 (-) | True | G1382875 |
| TU1579530 | lncRNA | upstream | 38360 | 48222577 ~ 48223011 (-) | True | G1382876 |
| XM_021566213.2 | mRNA | downstream | 89083 | 48089427 ~ 48093940 (-) | True | LOC110492156 |
| XM_036947103.1 | mRNA | downstream | 95434 | 48076504 ~ 48087589 (-) | True | LOC118939551 |
| LOC118939550 | mRNA | downstream | 108050 | 48042033 ~ 48074973 (-) | True | LOC118939550 |
| XM_036947102.1 | mRNA | downstream | 146963 | 48031902 ~ 48036060 (-) | True | LOC118939549 |
| XM_036947101.1 | mRNA | downstream | 147907 | 48031902 ~ 48035116 (-) | False | LOC118939549 |
| XM_036945780.1 | mRNA | upstream | 760 | 48184977 ~ 48196697 (-) | True | LOC110491083 |
| XR_005036537.1 | mRNA | upstream | 24076 | 48208293 ~ 48212214 (-) | False | LOC118939552 |
| XR_005036536.1 | mRNA | upstream | 24076 | 48208293 ~ 48212220 (-) | False | LOC118939552 |
| XM_036947110.1 | mRNA | upstream | 36541 | 48220758 ~ 48229927 (-) | False | LOC110492159 |
| XM_021566216.2 | mRNA | upstream | 36541 | 48220758 ~ 48230211 (-) | False | LOC110492159 |
| TU1579359 | other | downstream | 236801 | 47943379 ~ 47946222 (-) | True | G1382721 |
| TU1579060 | other | downstream | 734158 | 47425312 ~ 47448865 (-) | True | LOC110492148 |
| TU1577598 | other | downstream | 1093493 | 47087169 ~ 47089530 (-) | True | LOC110492137 |
| TU1577528 | other | downstream | 1303877 | 46878611 ~ 46879146 (-) | True | G1381036 |
| TU1577381 | other | downstream | 1421557 | 46759287 ~ 46761466 (-) | True | LOC110491077 |
| TU1579549 | other | upstream | 97996 | 48282213 ~ 48312958 (-) | True | G1382894 |
| TU1580193 | other | upstream | 1000091 | 49184308 ~ 49196326 (-) | True | LOC110492187 |
| TU1581430 | other | upstream | 1418901 | 49603118 ~ 49719539 (-) | True | LOC110491086 |
| TU1581769 | other | upstream | 1880604 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1582569 | other | upstream | 2871414 | 51055631 ~ 51056061 (-) | True | G1385645 |
