Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1581791 |
| length | 338 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G1384896 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50098002 ~ 50103021 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1581572 | lncRNA | downstream | 322020 | 49774003 ~ 49775982 (-) | True | G1384703 |
| TU1581564 | lncRNA | downstream | 329027 | 49768561 ~ 49768975 (-) | True | G1384695 |
| TU1581416 | lncRNA | downstream | 540512 | 49556496 ~ 49557490 (-) | True | G1384554 |
| TU1581337 | lncRNA | downstream | 687319 | 49409445 ~ 49410683 (-) | True | LOC110492195 |
| TU1581250 | lncRNA | downstream | 707728 | 49384035 ~ 49390274 (-) | True | G1384400 |
| TU1581833 | lncRNA | upstream | 106287 | 50209308 ~ 50210181 (-) | True | G1384934 |
| TU1581831 | lncRNA | upstream | 108480 | 50211501 ~ 50215831 (-) | False | G1384933 |
| TU1581832 | lncRNA | upstream | 108480 | 50211501 ~ 50215831 (-) | True | G1384933 |
| TU1581893 | lncRNA | upstream | 113088 | 50216109 ~ 50216338 (-) | True | G1384994 |
| TU1581896 | lncRNA | upstream | 118654 | 50221675 ~ 50221904 (-) | True | G1384997 |
| XM_036947162.1 | mRNA | downstream | 126709 | 49950665 ~ 49971293 (-) | True | itchb |
| XM_036947163.1 | mRNA | downstream | 126710 | 49950665 ~ 49971292 (-) | False | itchb |
| XM_036947161.1 | mRNA | downstream | 126711 | 49950665 ~ 49971291 (-) | False | itchb |
| XM_021566302.2 | mRNA | downstream | 159114 | 49933079 ~ 49938888 (-) | True | e2f1 |
| LOC110491088 | mRNA | downstream | 164252 | 49927464 ~ 49933750 (-) | True | LOC110491088 |
| XM_021566309.2 | mRNA | upstream | 211895 | 50314916 ~ 50318773 (-) | True | LOC110492208 |
| XM_021566314.2 | mRNA | upstream | 918435 | 51021456 ~ 51031919 (-) | False | mad2l2 |
| LOC110491089 | mRNA | upstream | 938102 | 51041123 ~ 51043794 (-) | False | LOC110491089 |
| LOC110491090 | mRNA | upstream | 973757 | 51076778 ~ 51077359 (-) | True | LOC110491090 |
| XM_021566315.2 | mRNA | upstream | 998762 | 51101783 ~ 51103933 (-) | True | LOC110492214 |
| TU1581769 | other | downstream | 32185 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1581430 | other | downstream | 378463 | 49603118 ~ 49719539 (-) | True | LOC110491086 |
| TU1580193 | other | downstream | 901676 | 49184308 ~ 49196326 (-) | True | LOC110492187 |
| TU1579549 | other | downstream | 1785044 | 48282213 ~ 48312958 (-) | True | G1382894 |
| TU1579359 | other | downstream | 2151780 | 47943379 ~ 47946222 (-) | True | G1382721 |
| TU1582569 | other | upstream | 952610 | 51055631 ~ 51056061 (-) | True | G1385645 |
| TU1582822 | other | upstream | 987624 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1582837 | other | upstream | 1010382 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1583828 | other | upstream | 1880113 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1585179 | other | upstream | 2315855 | 52418876 ~ 52428759 (-) | True | spen |
