Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1580856 |
| length | 351 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1384063 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50252012 ~ 50252362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
50,249,200
50,249,600
50,250,000
50,250,400
50,250,800
50,251,200
50,251,600
50,251,600
50,252,000
50,252,400
50,252,800
50,253,200
50,253,600
50,254,000
NC_048580.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1580853 | lncRNA | upstream | 1097 | 50249583 ~ 50250915 (+) | True | G1384061 |
| TU1580846 | lncRNA | upstream | 11419 | 50240362 ~ 50240593 (+) | True | G1384055 |
| TU1580841 | lncRNA | upstream | 20383 | 50231405 ~ 50231629 (+) | True | G1384050 |
| TU1580836 | lncRNA | upstream | 28752 | 50223043 ~ 50223260 (+) | True | G1384045 |
| TU1580834 | lncRNA | upstream | 30256 | 50221384 ~ 50221756 (+) | True | G1384043 |
| TU1580872 | lncRNA | downstream | 42535 | 50294897 ~ 50295441 (+) | True | G1384076 |
| TU1580849 | lncRNA | downstream | 61435 | 50313797 ~ 50314363 (+) | True | G1384058 |
| TU1580882 | lncRNA | downstream | 76993 | 50329355 ~ 50329678 (+) | True | G1384086 |
| TU1580888 | lncRNA | downstream | 83492 | 50335854 ~ 50336083 (+) | True | G1384092 |
| TU1580889 | lncRNA | downstream | 84273 | 50336635 ~ 50336933 (+) | True | G1384093 |
| XM_021566307.2 | mRNA | upstream | 42815 | 50121066 ~ 50209197 (+) | False | LOC100136219 |
| XM_036947165.1 | mRNA | upstream | 42815 | 50121066 ~ 50209197 (+) | False | LOC100136219 |
| XM_036947166.1 | mRNA | upstream | 42815 | 50121066 ~ 50209197 (+) | False | LOC100136219 |
| XM_036947167.1 | mRNA | upstream | 42815 | 50159082 ~ 50209197 (+) | False | LOC100136219 |
| XM_021566305.2 | mRNA | upstream | 236489 | 49996722 ~ 50015523 (+) | False | LOC110492206 |
| XM_036947173.1 | mRNA | downstream | 3106 | 50255468 ~ 50311045 (+) | False | LOC110492207 |
| XM_036947172.1 | mRNA | downstream | 3149 | 50255511 ~ 50311045 (+) | True | LOC110492207 |
| XM_021566310.2 | mRNA | downstream | 71783 | 50324145 ~ 50326821 (+) | True | LOC110492209 |
| XM_036947177.1 | mRNA | downstream | 237875 | 50490237 ~ 50793128 (+) | False | LOC110492210 |
| XM_036947176.1 | mRNA | downstream | 237876 | 50490238 ~ 50796195 (+) | False | LOC110492210 |
| TU1579025 | other | upstream | 1002137 | 49245582 ~ 49249875 (+) | False | LOC110492182 |
| TU1578917 | other | upstream | 1217874 | 49024931 ~ 49034138 (+) | False | LOC110492179 |
| TU1578916 | other | upstream | 1217874 | 49025211 ~ 49034138 (+) | True | LOC110492179 |
| TU1578405 | other | upstream | 1939196 | 48282210 ~ 48312816 (+) | True | LOC110492164 |
| TU1576401 | other | upstream | 3222820 | 47026122 ~ 47029192 (+) | True | LOC110491080 |
| TU1581021 | other | downstream | 237936 | 50490298 ~ 50529084 (+) | True | LOC110492210 |
| TU1581081 | other | downstream | 320330 | 50572692 ~ 50573050 (+) | True | G1384247 |
| TU1582637 | other | downstream | 1029041 | 51281403 ~ 51289259 (+) | True | nphp4 |
| TU1583194 | other | downstream | 1273651 | 51526013 ~ 51526813 (+) | True | G1386227 |
| TU1583221 | other | downstream | 1307791 | 51560153 ~ 51560878 (+) | True | G1386254 |
