Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1580930 |
| length | 856 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G1384102 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50391701 ~ 50418540 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
50,412,800
50,413,200
50,413,600
50,414,000
50,414,400
50,414,800
50,415,200
50,415,600
50,415,600
50,416,000
50,416,400
50,416,800
50,417,200
50,417,600
50,418,000
50,418,400
NC_048580.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1580941 | lncRNA | upstream | 50790 | 50360755 ~ 50364355 (+) | True | G1384110 |
| TU1580889 | lncRNA | upstream | 78212 | 50336635 ~ 50336933 (+) | True | G1384093 |
| TU1580888 | lncRNA | upstream | 79062 | 50335854 ~ 50336083 (+) | True | G1384092 |
| TU1580882 | lncRNA | upstream | 85467 | 50329355 ~ 50329678 (+) | True | G1384086 |
| TU1580849 | lncRNA | upstream | 100782 | 50313797 ~ 50314363 (+) | True | G1384058 |
| TU1580971 | lncRNA | downstream | 5442 | 50421497 ~ 50421979 (+) | True | G1384140 |
| TU1580972 | lncRNA | downstream | 6542 | 50422597 ~ 50422890 (+) | True | G1384141 |
| TU1580978 | lncRNA | downstream | 14456 | 50430511 ~ 50430727 (+) | True | G1384147 |
| TU1580992 | lncRNA | downstream | 29093 | 50445148 ~ 50445436 (+) | True | G1384161 |
| TU1580993 | lncRNA | downstream | 30129 | 50446184 ~ 50446439 (+) | True | G1384162 |
| XM_021566310.2 | mRNA | upstream | 88324 | 50324145 ~ 50326821 (+) | True | LOC110492209 |
| XM_036947170.1 | mRNA | upstream | 104100 | 50241978 ~ 50311045 (+) | False | LOC110492207 |
| XM_036947177.1 | mRNA | downstream | 74182 | 50490237 ~ 50793128 (+) | False | LOC110492210 |
| XM_036947176.1 | mRNA | downstream | 74183 | 50490238 ~ 50796195 (+) | False | LOC110492210 |
| XR_002469095.2 | mRNA | downstream | 522669 | 50938724 ~ 50939714 (+) | True | LOC110492909 |
| XR_005036540.1 | mRNA | downstream | 672046 | 51088101 ~ 51094492 (+) | True | LOC118939554 |
| XM_021566318.2 | mRNA | downstream | 694053 | 51110108 ~ 51113467 (+) | True | c16h1orf174 |
| TU1579025 | other | upstream | 1165270 | 49245582 ~ 49249875 (+) | False | LOC110492182 |
| TU1578917 | other | upstream | 1381007 | 49024931 ~ 49034138 (+) | False | LOC110492179 |
| TU1578916 | other | upstream | 1381007 | 49025211 ~ 49034138 (+) | True | LOC110492179 |
| TU1578405 | other | upstream | 2102329 | 48282210 ~ 48312816 (+) | True | LOC110492164 |
| TU1576401 | other | upstream | 3385953 | 47026122 ~ 47029192 (+) | True | LOC110491080 |
| TU1581021 | other | downstream | 74243 | 50490298 ~ 50529084 (+) | True | LOC110492210 |
| TU1581081 | other | downstream | 156637 | 50572692 ~ 50573050 (+) | True | G1384247 |
| TU1582637 | other | downstream | 865348 | 51281403 ~ 51289259 (+) | True | nphp4 |
| TU1583194 | other | downstream | 1109958 | 51526013 ~ 51526813 (+) | True | G1386227 |
| TU1583221 | other | downstream | 1144098 | 51560153 ~ 51560878 (+) | True | G1386254 |
