Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1583018 |
| length | 686 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1386059 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51361365 ~ 51362050 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1582983 | lncRNA | downstream | 20833 | 51305494 ~ 51340532 (-) | True | G1386030 |
| TU1582589 | lncRNA | downstream | 289127 | 51071866 ~ 51072238 (-) | True | G1385665 |
| TU1582558 | lncRNA | downstream | 312985 | 51048066 ~ 51048380 (-) | True | G1385634 |
| TU1582553 | lncRNA | downstream | 317701 | 51043445 ~ 51043664 (-) | True | LOC110491089 |
| TU1582535 | lncRNA | downstream | 329462 | 51029981 ~ 51031903 (-) | True | mad2l2 |
| TU1583019 | lncRNA | upstream | 14662 | 51376712 ~ 51384868 (-) | True | G1386060 |
| TU1583024 | lncRNA | upstream | 24176 | 51386226 ~ 51386542 (-) | True | G1386064 |
| TU1583027 | lncRNA | upstream | 28226 | 51390276 ~ 51390551 (-) | True | G1386067 |
| TU1583029 | lncRNA | upstream | 29389 | 51391439 ~ 51391669 (-) | True | G1386069 |
| TU1583036 | lncRNA | upstream | 35641 | 51397691 ~ 51397956 (-) | True | G1386076 |
| XM_021566316.2 | mRNA | downstream | 243515 | 51113591 ~ 51117850 (-) | False | dffb |
| XM_021566317.2 | mRNA | downstream | 243522 | 51113591 ~ 51117843 (-) | False | dffb |
| XM_021566315.2 | mRNA | downstream | 257432 | 51101783 ~ 51103933 (-) | True | LOC110492214 |
| LOC110491090 | mRNA | downstream | 284006 | 51076778 ~ 51077359 (-) | True | LOC110491090 |
| LOC110491089 | mRNA | downstream | 317571 | 51041123 ~ 51043794 (-) | False | LOC110491089 |
| XM_021566322.2 | mRNA | upstream | 160299 | 51522349 ~ 51603970 (-) | True | LOC110492220 |
| XM_036945783.1 | mRNA | upstream | 328833 | 51690883 ~ 51717957 (-) | True | LOC110491091 |
| XM_021566323.2 | mRNA | upstream | 359920 | 51721970 ~ 51735560 (-) | False | LOC110492221 |
| XM_036947183.1 | mRNA | upstream | 359920 | 51721970 ~ 51738292 (-) | True | LOC110492221 |
| XM_021566355.2 | mRNA | upstream | 618564 | 51980614 ~ 51990025 (-) | False | LOC110492226 |
| TU1582822 | other | downstream | 232717 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1582837 | other | downstream | 246300 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1582569 | other | downstream | 305304 | 51055631 ~ 51056061 (-) | True | G1385645 |
| TU1581769 | other | downstream | 1295548 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1581430 | other | downstream | 1641826 | 49603118 ~ 49719539 (-) | True | LOC110491086 |
| TU1583828 | other | upstream | 621084 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1585179 | other | upstream | 1056826 | 52418876 ~ 52428759 (-) | True | spen |
| TU1585247 | other | upstream | 1209660 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585503 | other | upstream | 1669882 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585952 | other | upstream | 2368287 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
