Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1583888 |
| length | 308 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1386852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51995091 ~ 51995398 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1583818 | lncRNA | downstream | 13468 | 51978399 ~ 51981623 (-) | False | LOC110492226 |
| TU1583816 | lncRNA | downstream | 13468 | 51980623 ~ 51981623 (-) | False | LOC110492226 |
| TU1583873 | lncRNA | downstream | 24617 | 51968579 ~ 51970474 (-) | True | G1386842 |
| TU1583834 | lncRNA | downstream | 72394 | 51922431 ~ 51922697 (-) | True | G1386806 |
| TU1583832 | lncRNA | downstream | 76930 | 51917949 ~ 51918161 (-) | True | G1386804 |
| TU1583916 | lncRNA | upstream | 75482 | 52070880 ~ 52071190 (-) | True | G1386877 |
| TU1583917 | lncRNA | upstream | 78904 | 52074302 ~ 52077425 (-) | True | LOC110492230 |
| TU1583921 | lncRNA | upstream | 84518 | 52079916 ~ 52080116 (-) | True | G1386881 |
| TU1583922 | lncRNA | upstream | 84739 | 52080137 ~ 52080369 (-) | True | G1386882 |
| TU1583927 | lncRNA | upstream | 89711 | 52085109 ~ 52085315 (-) | True | G1386887 |
| XM_021566355.2 | mRNA | downstream | 5066 | 51980614 ~ 51990025 (-) | False | LOC110492226 |
| XM_021566356.2 | mRNA | downstream | 5066 | 51980614 ~ 51990025 (-) | False | LOC110492226 |
| XM_036947183.1 | mRNA | downstream | 256799 | 51721970 ~ 51738292 (-) | True | LOC110492221 |
| XM_021566323.2 | mRNA | downstream | 259531 | 51721970 ~ 51735560 (-) | False | LOC110492221 |
| XM_036945783.1 | mRNA | downstream | 277134 | 51690883 ~ 51717957 (-) | True | LOC110491091 |
| XM_021566367.2 | mRNA | upstream | 3160 | 51998558 ~ 52063138 (-) | False | LOC110492229 |
| XM_036947198.1 | mRNA | upstream | 3160 | 51998558 ~ 52069190 (-) | False | LOC110492229 |
| XM_036947199.1 | mRNA | upstream | 3160 | 51998558 ~ 52069191 (-) | False | LOC110492229 |
| XM_021566366.2 | mRNA | upstream | 3160 | 51998558 ~ 52069366 (-) | True | LOC110492229 |
| XR_002468978.2 | mRNA | upstream | 78342 | 52073740 ~ 52077554 (-) | False | LOC110492230 |
| TU1583828 | other | downstream | 5096 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1582822 | other | downstream | 866443 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1582837 | other | downstream | 880026 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1582569 | other | downstream | 939030 | 51055631 ~ 51056061 (-) | True | G1385645 |
| TU1581769 | other | downstream | 1929274 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1585179 | other | upstream | 423478 | 52418876 ~ 52428759 (-) | True | spen |
| TU1585247 | other | upstream | 576312 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585503 | other | upstream | 1036534 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585952 | other | upstream | 1734939 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1587231 | other | upstream | 2549330 | 54544728 ~ 54545243 (-) | True | G1389763 |
