Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1583921 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1386881 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52079916 ~ 52080116 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1583917 | lncRNA | downstream | 2491 | 52074302 ~ 52077425 (-) | True | LOC110492230 |
| TU1583916 | lncRNA | downstream | 8726 | 52070880 ~ 52071190 (-) | True | G1386877 |
| TU1583888 | lncRNA | downstream | 84518 | 51995091 ~ 51995398 (-) | True | G1386852 |
| TU1583818 | lncRNA | downstream | 98293 | 51978399 ~ 51981623 (-) | False | LOC110492226 |
| TU1583816 | lncRNA | downstream | 98293 | 51980623 ~ 51981623 (-) | False | LOC110492226 |
| TU1583922 | lncRNA | upstream | 21 | 52080137 ~ 52080369 (-) | True | G1386882 |
| TU1583927 | lncRNA | upstream | 4993 | 52085109 ~ 52085315 (-) | True | G1386887 |
| TU1583928 | lncRNA | upstream | 5705 | 52085821 ~ 52086036 (-) | True | G1386888 |
| TU1583929 | lncRNA | upstream | 9135 | 52089251 ~ 52089832 (-) | True | G1386889 |
| TU1585267 | lncRNA | upstream | 513452 | 52593568 ~ 52593778 (-) | True | G1388023 |
| XR_002468978.2 | mRNA | downstream | 2362 | 52073740 ~ 52077554 (-) | False | LOC110492230 |
| XM_021566366.2 | mRNA | downstream | 10550 | 51998558 ~ 52069366 (-) | True | LOC110492229 |
| XM_036947199.1 | mRNA | downstream | 10725 | 51998558 ~ 52069191 (-) | False | LOC110492229 |
| XM_036947198.1 | mRNA | downstream | 10726 | 51998558 ~ 52069190 (-) | False | LOC110492229 |
| XM_021566367.2 | mRNA | downstream | 16778 | 51998558 ~ 52063138 (-) | False | LOC110492229 |
| XM_021566371.2 | mRNA | upstream | 88699 | 52168815 ~ 52206285 (-) | True | LOC110492234 |
| XM_021566372.2 | mRNA | upstream | 161482 | 52241598 ~ 52267535 (-) | False | plekhm2 |
| XM_021566373.2 | mRNA | upstream | 161482 | 52241598 ~ 52267535 (-) | False | plekhm2 |
| XM_021566374.2 | mRNA | upstream | 161482 | 52241598 ~ 52267535 (-) | True | plekhm2 |
| XM_021566378.2 | mRNA | upstream | 187619 | 52267735 ~ 52273001 (-) | True | ddost |
| TU1583828 | other | downstream | 89921 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1582822 | other | downstream | 951268 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1582837 | other | downstream | 964851 | 51113403 ~ 51115065 (-) | True | dffb |
| TU1582569 | other | downstream | 1023855 | 51055631 ~ 51056061 (-) | True | G1385645 |
| TU1581769 | other | downstream | 2014099 | 50064821 ~ 50065817 (-) | True | G1384875 |
| TU1585179 | other | upstream | 338760 | 52418876 ~ 52428759 (-) | True | spen |
| TU1585247 | other | upstream | 491594 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585503 | other | upstream | 951816 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585952 | other | upstream | 1650221 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1587231 | other | upstream | 2464612 | 54544728 ~ 54545243 (-) | True | G1389763 |
