Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1585288 |
| length | 245 |
| lncRNA type | inter_gene |
| GC content | 0.28 |
| exon number | 1 |
| gene id | G1388044 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52640675 ~ 52640919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1585283 | lncRNA | downstream | 22569 | 52617675 ~ 52618106 (-) | True | LOC110491093 |
| TU1585280 | lncRNA | downstream | 28538 | 52611801 ~ 52612137 (-) | True | G1388036 |
| TU1585269 | lncRNA | downstream | 42277 | 52598160 ~ 52598398 (-) | True | G1388025 |
| TU1585267 | lncRNA | downstream | 46897 | 52593568 ~ 52593778 (-) | True | G1388023 |
| TU1583929 | lncRNA | downstream | 550843 | 52089251 ~ 52089832 (-) | True | G1386889 |
| TU1585294 | lncRNA | upstream | 5641 | 52646560 ~ 52646800 (-) | True | G1388050 |
| TU1585366 | lncRNA | upstream | 97918 | 52738837 ~ 52739737 (-) | True | G1388104 |
| TU1585367 | lncRNA | upstream | 98841 | 52739760 ~ 52739987 (-) | True | G1388105 |
| TU1585336 | lncRNA | upstream | 110841 | 52751760 ~ 52753211 (-) | True | G1388083 |
| TU1585374 | lncRNA | upstream | 140689 | 52781608 ~ 52782117 (-) | True | G1388110 |
| XM_036945784.1 | mRNA | downstream | 22619 | 52606434 ~ 52618056 (-) | False | LOC110491093 |
| XM_021566397.2 | mRNA | downstream | 63532 | 52566433 ~ 52577143 (-) | False | LOC110492250 |
| XM_021566395.2 | mRNA | downstream | 108450 | 52514283 ~ 52532225 (-) | True | tmem240a |
| XM_036947206.1 | mRNA | downstream | 136998 | 52489746 ~ 52503677 (-) | True | LOC110492247 |
| XM_021566394.2 | mRNA | downstream | 146723 | 52489746 ~ 52493952 (-) | False | LOC110492247 |
| XM_021566418.2 | mRNA | upstream | 46640 | 52687559 ~ 52692433 (-) | True | rassf11 |
| XR_005036541.1 | mRNA | upstream | 137576 | 52778495 ~ 52780254 (-) | True | LOC118939555 |
| XM_036947218.1 | mRNA | upstream | 163506 | 52804425 ~ 52837289 (-) | False | LOC110491094 |
| XM_036947219.1 | mRNA | upstream | 163506 | 52804425 ~ 52837289 (-) | False | LOC110491094 |
| XM_036947221.1 | mRNA | upstream | 163506 | 52804425 ~ 52837289 (-) | False | LOC110491094 |
| TU1585247 | other | downstream | 68368 | 52571710 ~ 52572307 (-) | True | LOC110492250 |
| TU1585179 | other | downstream | 211916 | 52418876 ~ 52428759 (-) | True | spen |
| TU1583828 | other | downstream | 650680 | 51983134 ~ 51989995 (-) | True | LOC110492226 |
| TU1582822 | other | downstream | 1512027 | 51090645 ~ 51128648 (-) | True | G1385888 |
| TU1585503 | other | upstream | 391013 | 53031932 ~ 53032921 (-) | True | G1388236 |
| TU1585952 | other | upstream | 1089418 | 53730337 ~ 53732915 (-) | True | LOC110492299 |
| TU1587231 | other | upstream | 1903809 | 54544728 ~ 54545243 (-) | True | G1389763 |
| TU1587517 | other | upstream | 2343899 | 54984818 ~ 54986263 (-) | True | G1390030 |
| TU1588497 | other | upstream | 3183240 | 55824159 ~ 55826631 (-) | True | LOC110492352 |
